Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
VCX3AQ9NNX9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3AQ9NNX9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3AQ9NNX9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3AQ9NNX9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3AQ9NNX9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3AQ9NNX9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VCX3AQ9NNX9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
VCX3AQ9NNX9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
VCX3AQ9NNX9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VCX3AQ9NNX9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
VCX3AQ9NNX9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VCX3AQ9NNX9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.83■□□□□ 0.77
VCX3AQ9NNX9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.83■□□□□ 0.77
VCX3AQ9NNX9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
VCX3AQ9NNX9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VCX3AQ9NNX9 AL592295.1-201ENST00000400984 884 ntBASIC19.83■□□□□ 0.77
VCX3AQ9NNX9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.83■□□□□ 0.77
VCX3AQ9NNX9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCX3AQ9NNX9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCX3AQ9NNX9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCX3AQ9NNX9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
VCX3AQ9NNX9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCX3AQ9NNX9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCX3AQ9NNX9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.82■□□□□ 0.76
VCX3AQ9NNX9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 AC060814.1-201ENST00000554326 538 ntBASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.81■□□□□ 0.76
VCX3AQ9NNX9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 AC144652.1-201ENST00000609974 1624 ntBASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 SMG8-203ENST00000578922 2178 ntBASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3AQ9NNX9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCX3AQ9NNX9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3AQ9NNX9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VCX3AQ9NNX9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms