Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
POPDC3Q9HBV1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POPDC3Q9HBV1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POPDC3Q9HBV1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POPDC3Q9HBV1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POPDC3Q9HBV1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POPDC3Q9HBV1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POPDC3Q9HBV1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POPDC3Q9HBV1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POPDC3Q9HBV1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.93■□□□□ 0.94
POPDC3Q9HBV1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.93■□□□□ 0.94
POPDC3Q9HBV1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POPDC3Q9HBV1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
POPDC3Q9HBV1 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.93■□□□□ 0.94
POPDC3Q9HBV1 AP001330.3-201ENST00000520123 633 ntBASIC20.93■□□□□ 0.94
POPDC3Q9HBV1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POPDC3Q9HBV1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.93■□□□□ 0.94
POPDC3Q9HBV1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.93■□□□□ 0.94
POPDC3Q9HBV1 AL024507.2-201ENST00000606070 2574 ntBASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 AL355001.2-201ENST00000620617 1191 ntBASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 AC105233.4-201ENST00000642045 216 ntBASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 TSPY26P-201ENST00000476365 1326 ntBASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POPDC3Q9HBV1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 RASA4CP-201ENST00000424092 1398 ntBASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POPDC3Q9HBV1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 AC055733.4-201ENST00000638462 1354 ntBASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 MIR939-201ENST00000401314 82 ntBASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 AC110285.6-201ENST00000617652 491 ntBASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
POPDC3Q9HBV1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
POPDC3Q9HBV1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
POPDC3Q9HBV1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
POPDC3Q9HBV1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
POPDC3Q9HBV1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 MIR572-201ENST00000384983 95 ntBASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 AC091305.1-201ENST00000479476 895 ntBASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 AF106564.1-201ENST00000607058 2553 ntBASIC20.89■□□□□ 0.93
POPDC3Q9HBV1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms