Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRF2Q9HAW0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.36■□□□□ 0.85
BRF2Q9HAW0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
BRF2Q9HAW0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRF2Q9HAW0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BRF2Q9HAW0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRF2Q9HAW0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.36■□□□□ 0.85
BRF2Q9HAW0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.36■□□□□ 0.85
BRF2Q9HAW0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.36■□□□□ 0.85
BRF2Q9HAW0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.36■□□□□ 0.85
BRF2Q9HAW0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRF2Q9HAW0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 AL139246.5-201ENST00000606645 996 ntBASIC20.35■□□□□ 0.85
BRF2Q9HAW0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 FEM1AP4-201ENST00000443167 1987 ntBASIC20.35■□□□□ 0.85
BRF2Q9HAW0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRF2Q9HAW0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 SUDS3P1-201ENST00000505831 966 ntBASIC20.34■□□□□ 0.85
BRF2Q9HAW0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
BRF2Q9HAW0 BX005040.4-201ENST00000637145 1518 ntBASIC20.33■□□□□ 0.85
BRF2Q9HAW0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.33■□□□□ 0.85
BRF2Q9HAW0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.33■□□□□ 0.85
BRF2Q9HAW0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRF2Q9HAW0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.33■□□□□ 0.85
BRF2Q9HAW0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRF2Q9HAW0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRF2Q9HAW0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRF2Q9HAW0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
BRF2Q9HAW0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.33■□□□□ 0.85
BRF2Q9HAW0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRF2Q9HAW0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.33■□□□□ 0.85
BRF2Q9HAW0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BRF2Q9HAW0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BRF2Q9HAW0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BRF2Q9HAW0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 AC055733.4-201ENST00000638462 1354 ntBASIC20.32■□□□□ 0.84
BRF2Q9HAW0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BRF2Q9HAW0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 AC005224.4-201ENST00000583262 1652 ntBASIC20.31■□□□□ 0.84
BRF2Q9HAW0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRF2Q9HAW0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRF2Q9HAW0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
BRF2Q9HAW0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRF2Q9HAW0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.3■□□□□ 0.84
BRF2Q9HAW0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRF2Q9HAW0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.3■□□□□ 0.84
BRF2Q9HAW0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms