Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF41Q9H4P4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF41Q9H4P4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
RNF41Q9H4P4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.14■■□□□ 1.62
RNF41Q9H4P4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.14■■□□□ 1.62
RNF41Q9H4P4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
RNF41Q9H4P4 AC053503.5-201ENST00000601508 636 ntBASIC25.14■■□□□ 1.62
RNF41Q9H4P4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.61
RNF41Q9H4P4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
RNF41Q9H4P4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
RNF41Q9H4P4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RNF41Q9H4P4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
RNF41Q9H4P4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.13■■□□□ 1.61
RNF41Q9H4P4 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.13■■□□□ 1.61
RNF41Q9H4P4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.13■■□□□ 1.61
RNF41Q9H4P4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF41Q9H4P4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF41Q9H4P4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
RNF41Q9H4P4 KRT19P1-201ENST00000405746 1186 ntBASIC25.13■■□□□ 1.61
RNF41Q9H4P4 AC104564.3-201ENST00000582367 638 ntBASIC25.13■■□□□ 1.61
RNF41Q9H4P4 KRT18P61-201ENST00000585825 1298 ntBASIC25.13■■□□□ 1.61
RNF41Q9H4P4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.13■■□□□ 1.61
RNF41Q9H4P4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RNF41Q9H4P4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF41Q9H4P4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RNF41Q9H4P4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF41Q9H4P4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
RNF41Q9H4P4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RNF41Q9H4P4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
RNF41Q9H4P4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RNF41Q9H4P4 AC104187.1-201ENST00000607510 612 ntBASIC25.11■■□□□ 1.61
RNF41Q9H4P4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF41Q9H4P4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RNF41Q9H4P4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.1■■□□□ 1.61
RNF41Q9H4P4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
RNF41Q9H4P4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF41Q9H4P4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF41Q9H4P4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF41Q9H4P4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC25.09■■□□□ 1.61
RNF41Q9H4P4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF41Q9H4P4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF41Q9H4P4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF41Q9H4P4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.09■■□□□ 1.61
RNF41Q9H4P4 AC138907.5-202ENST00000569484 235 ntBASIC25.09■■□□□ 1.61
RNF41Q9H4P4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF41Q9H4P4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF41Q9H4P4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.08■■□□□ 1.61
RNF41Q9H4P4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
RNF41Q9H4P4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF41Q9H4P4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
RNF41Q9H4P4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF41Q9H4P4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.08■■□□□ 1.61
RNF41Q9H4P4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF41Q9H4P4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.08■■□□□ 1.61
RNF41Q9H4P4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RNF41Q9H4P4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF41Q9H4P4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RNF41Q9H4P4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.08■■□□□ 1.6
RNF41Q9H4P4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.08■■□□□ 1.6
RNF41Q9H4P4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF41Q9H4P4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF41Q9H4P4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF41Q9H4P4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RNF41Q9H4P4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms