Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 AF213884.3-201ENST00000563833 479 ntBASIC16.32■□□□□ 0.2
MS4A6AQ9H2W1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.32■□□□□ 0.2
MS4A6AQ9H2W1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A6AQ9H2W1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.32■□□□□ 0.2
MS4A6AQ9H2W1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.32■□□□□ 0.2
MS4A6AQ9H2W1 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.32■□□□□ 0.2
MS4A6AQ9H2W1 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.32■□□□□ 0.2
MS4A6AQ9H2W1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A6AQ9H2W1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A6AQ9H2W1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 MIR939-201ENST00000401314 82 ntBASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A6AQ9H2W1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 RASA4CP-201ENST00000424092 1398 ntBASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 AC091305.1-201ENST00000479476 895 ntBASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 IGHV3-19-201ENST00000521488 291 ntBASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 AL031432.3-201ENST00000607698 485 ntBASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 AL136967.2-201ENST00000623968 743 ntBASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MS4A6AQ9H2W1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A6AQ9H2W1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 TSPY26P-201ENST00000476365 1326 ntBASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 AC142381.2-201ENST00000566120 298 ntBASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A6AQ9H2W1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A6AQ9H2W1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A6AQ9H2W1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms