Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 HNRNPA1P23-201ENST00000491091 1133 ntBASIC23.3■■□□□ 1.32
RNF39Q9H2S5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RNF39Q9H2S5 AC011767.1-201ENST00000617410 1153 ntBASIC23.3■■□□□ 1.32
RNF39Q9H2S5 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC23.3■■□□□ 1.32
RNF39Q9H2S5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.3■■□□□ 1.32
RNF39Q9H2S5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RNF39Q9H2S5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF39Q9H2S5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 BID-214ENST00000617586 542 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF39Q9H2S5 AC139530.1-201ENST00000575312 1977 ntBASIC23.29■■□□□ 1.32
RNF39Q9H2S5 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.28■■□□□ 1.32
RNF39Q9H2S5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RNF39Q9H2S5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF39Q9H2S5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF39Q9H2S5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RNF39Q9H2S5 AC118465.1-201ENST00000513820 1271 ntBASIC23.28■■□□□ 1.32
RNF39Q9H2S5 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC23.28■■□□□ 1.32
RNF39Q9H2S5 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC23.28■■□□□ 1.32
RNF39Q9H2S5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.28■■□□□ 1.32
RNF39Q9H2S5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF39Q9H2S5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF39Q9H2S5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF39Q9H2S5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RNF39Q9H2S5 C1orf229-201ENST00000623686 2258 ntBASIC23.26■■□□□ 1.31
RNF39Q9H2S5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RNF39Q9H2S5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF39Q9H2S5 ID1-201ENST00000376105 1233 ntBASIC23.26■■□□□ 1.31
RNF39Q9H2S5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF39Q9H2S5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF39Q9H2S5 NPM1P28-201ENST00000492269 840 ntBASIC23.26■■□□□ 1.31
RNF39Q9H2S5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF39Q9H2S5 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC23.26■■□□□ 1.31
RNF39Q9H2S5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.26■■□□□ 1.31
RNF39Q9H2S5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF39Q9H2S5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.26■■□□□ 1.31
RNF39Q9H2S5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF39Q9H2S5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
RNF39Q9H2S5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.26■■□□□ 1.31
RNF39Q9H2S5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 AP001160.3-201ENST00000601484 763 ntBASIC23.25■■□□□ 1.31
RNF39Q9H2S5 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF39Q9H2S5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF39Q9H2S5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.24■■□□□ 1.31
RNF39Q9H2S5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RNF39Q9H2S5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF39Q9H2S5 AL035696.2-201ENST00000407941 709 ntBASIC23.24■■□□□ 1.31
RNF39Q9H2S5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RNF39Q9H2S5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.24■■□□□ 1.31
RNF39Q9H2S5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF39Q9H2S5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF39Q9H2S5 AP006587.3-201ENST00000525742 1516 ntBASIC23.23■■□□□ 1.31
RNF39Q9H2S5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF39Q9H2S5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF39Q9H2S5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF39Q9H2S5 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RNF39Q9H2S5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF39Q9H2S5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RNF39Q9H2S5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF39Q9H2S5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms