Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NIPSNAP3BQ9BS92 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NIPSNAP3BQ9BS92 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3BQ9BS92 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3BQ9BS92 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.91■□□□□ 0.3
NIPSNAP3BQ9BS92 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3BQ9BS92 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3BQ9BS92 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3BQ9BS92 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3BQ9BS92 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NIPSNAP3BQ9BS92 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3BQ9BS92 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.91■□□□□ 0.3
NIPSNAP3BQ9BS92 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NIPSNAP3BQ9BS92 AL020996.1-203ENST00000536896 2307 ntBASIC16.91■□□□□ 0.3
NIPSNAP3BQ9BS92 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.91■□□□□ 0.3
NIPSNAP3BQ9BS92 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NIPSNAP3BQ9BS92 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.9■□□□□ 0.3
NIPSNAP3BQ9BS92 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NIPSNAP3BQ9BS92 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NIPSNAP3BQ9BS92 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3BQ9BS92 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 AC103834.1-201ENST00000520383 144 ntBASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 AC087289.5-201ENST00000586076 3175 ntBASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3BQ9BS92 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3BQ9BS92 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3BQ9BS92 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.86■□□□□ 0.29
NIPSNAP3BQ9BS92 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3BQ9BS92 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3BQ9BS92 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3BQ9BS92 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms