Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
NPAS2Q99743 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS2Q99743 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.74■□□□□ 0.91
NPAS2Q99743 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
NPAS2Q99743 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS2Q99743 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
NPAS2Q99743 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.73■□□□□ 0.91
NPAS2Q99743 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS2Q99743 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.73■□□□□ 0.91
NPAS2Q99743 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS2Q99743 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NPAS2Q99743 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS2Q99743 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS2Q99743 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.73■□□□□ 0.91
NPAS2Q99743 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
NPAS2Q99743 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS2Q99743 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
NPAS2Q99743 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.72■□□□□ 0.91
NPAS2Q99743 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
NPAS2Q99743 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NPAS2Q99743 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.72■□□□□ 0.91
NPAS2Q99743 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS2Q99743 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS2Q99743 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.72■□□□□ 0.91
NPAS2Q99743 AC105265.2-201ENST00000467189 838 ntBASIC20.72■□□□□ 0.91
NPAS2Q99743 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NPAS2Q99743 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.72■□□□□ 0.91
NPAS2Q99743 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.72■□□□□ 0.91
NPAS2Q99743 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
NPAS2Q99743 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS2Q99743 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NPAS2Q99743 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NPAS2Q99743 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NPAS2Q99743 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS2Q99743 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
NPAS2Q99743 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS2Q99743 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.71■□□□□ 0.91
NPAS2Q99743 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.71■□□□□ 0.91
NPAS2Q99743 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.71■□□□□ 0.91
NPAS2Q99743 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.71■□□□□ 0.91
NPAS2Q99743 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.71■□□□□ 0.91
NPAS2Q99743 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
NPAS2Q99743 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.71■□□□□ 0.91
NPAS2Q99743 AC091305.1-201ENST00000479476 895 ntBASIC20.71■□□□□ 0.91
NPAS2Q99743 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.71■□□□□ 0.91
NPAS2Q99743 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.71■□□□□ 0.91
NPAS2Q99743 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.71■□□□□ 0.91
NPAS2Q99743 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.71■□□□□ 0.91
NPAS2Q99743 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPAS2Q99743 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NPAS2Q99743 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.71■□□□□ 0.91
NPAS2Q99743 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.7■□□□□ 0.9
NPAS2Q99743 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.7■□□□□ 0.9
NPAS2Q99743 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.7■□□□□ 0.9
NPAS2Q99743 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.7■□□□□ 0.9
NPAS2Q99743 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 AC008764.7-201ENST00000593779 1081 ntBASIC20.7■□□□□ 0.9
NPAS2Q99743 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NPAS2Q99743 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.7■□□□□ 0.9
NPAS2Q99743 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NPAS2Q99743 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPAS2Q99743 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS2Q99743 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.69■□□□□ 0.9
NPAS2Q99743 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS2Q99743 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.69■□□□□ 0.9
NPAS2Q99743 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS2Q99743 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
NPAS2Q99743 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS2Q99743 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS2Q99743 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.69■□□□□ 0.9
NPAS2Q99743 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS2Q99743 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS2Q99743 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS2Q99743 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms