Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC38A3Q99624 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC38A3Q99624 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC38A3Q99624 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC38A3Q99624 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC38A3Q99624 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC38A3Q99624 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC38A3Q99624 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC38A3Q99624 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC38A3Q99624 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC38A3Q99624 MIR663A-201ENST00000385250 93 ntBASIC20.62■□□□□ 0.89
SLC38A3Q99624 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC38A3Q99624 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC38A3Q99624 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC38A3Q99624 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC38A3Q99624 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC38A3Q99624 AC231657.2-201ENST00000624556 255 ntBASIC20.62■□□□□ 0.89
SLC38A3Q99624 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC38A3Q99624 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC38A3Q99624 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC38A3Q99624 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC38A3Q99624 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC38A3Q99624 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC38A3Q99624 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC38A3Q99624 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
SLC38A3Q99624 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC38A3Q99624 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC38A3Q99624 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC38A3Q99624 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC38A3Q99624 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SLC38A3Q99624 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC38A3Q99624 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC38A3Q99624 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC38A3Q99624 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC38A3Q99624 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC38A3Q99624 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A3Q99624 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC38A3Q99624 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.6■□□□□ 0.89
SLC38A3Q99624 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A3Q99624 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A3Q99624 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A3Q99624 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLC38A3Q99624 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC38A3Q99624 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
SLC38A3Q99624 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A3Q99624 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC38A3Q99624 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SLC38A3Q99624 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A3Q99624 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A3Q99624 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A3Q99624 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A3Q99624 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A3Q99624 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A3Q99624 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A3Q99624 C1orf229-201ENST00000623686 2258 ntBASIC20.6■□□□□ 0.89
SLC38A3Q99624 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SLC38A3Q99624 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 AC007322.1-201ENST00000426983 750 ntBASIC20.59■□□□□ 0.89
SLC38A3Q99624 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.59■□□□□ 0.89
SLC38A3Q99624 DUX4L16-201ENST00000555130 1264 ntBASIC20.59■□□□□ 0.89
SLC38A3Q99624 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC38A3Q99624 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
SLC38A3Q99624 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC38A3Q99624 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC38A3Q99624 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC38A3Q99624 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A3Q99624 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
SLC38A3Q99624 C9orf163-202ENST00000624034 2573 ntBASIC20.58■□□□□ 0.89
SLC38A3Q99624 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SLC38A3Q99624 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A3Q99624 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A3Q99624 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A3Q99624 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC38A3Q99624 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A3Q99624 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A3Q99624 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A3Q99624 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SLC38A3Q99624 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC38A3Q99624 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.58■□□□□ 0.89
SLC38A3Q99624 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A3Q99624 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.58■□□□□ 0.89
SLC38A3Q99624 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A3Q99624 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC38A3Q99624 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC38A3Q99624 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC38A3Q99624 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC38A3Q99624 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC38A3Q99624 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC38A3Q99624 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms