Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
CASD1Q96PB1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
CASD1Q96PB1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.87■■□□□ 1.25
CASD1Q96PB1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CASD1Q96PB1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.87■■□□□ 1.25
CASD1Q96PB1 AC120498.10-201ENST00000621827 505 ntBASIC22.87■■□□□ 1.25
CASD1Q96PB1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
CASD1Q96PB1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CASD1Q96PB1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CASD1Q96PB1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.87■■□□□ 1.25
CASD1Q96PB1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CASD1Q96PB1 POU5F1P4-201ENST00000413175 1085 ntBASIC22.86■■□□□ 1.25
CASD1Q96PB1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
CASD1Q96PB1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.86■■□□□ 1.25
CASD1Q96PB1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.86■■□□□ 1.25
CASD1Q96PB1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.86■■□□□ 1.25
CASD1Q96PB1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.86■■□□□ 1.25
CASD1Q96PB1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CASD1Q96PB1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.86■■□□□ 1.25
CASD1Q96PB1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
CASD1Q96PB1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.86■■□□□ 1.25
CASD1Q96PB1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.85■■□□□ 1.25
CASD1Q96PB1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CASD1Q96PB1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CASD1Q96PB1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CASD1Q96PB1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.85■■□□□ 1.25
CASD1Q96PB1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CASD1Q96PB1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CASD1Q96PB1 AL512625.2-201ENST00000417533 625 ntBASIC22.85■■□□□ 1.25
CASD1Q96PB1 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.85■■□□□ 1.25
CASD1Q96PB1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CASD1Q96PB1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.85■■□□□ 1.25
CASD1Q96PB1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CASD1Q96PB1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.85■■□□□ 1.25
CASD1Q96PB1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.85■■□□□ 1.25
CASD1Q96PB1 AC016405.3-201ENST00000607710 860 ntBASIC22.85■■□□□ 1.25
CASD1Q96PB1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CASD1Q96PB1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CASD1Q96PB1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CASD1Q96PB1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CASD1Q96PB1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CASD1Q96PB1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CASD1Q96PB1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.84■■□□□ 1.25
CASD1Q96PB1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CASD1Q96PB1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CASD1Q96PB1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CASD1Q96PB1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CASD1Q96PB1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.84■■□□□ 1.25
CASD1Q96PB1 AC069236.1-201ENST00000604339 616 ntBASIC22.84■■□□□ 1.25
CASD1Q96PB1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.84■■□□□ 1.25
CASD1Q96PB1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.84■■□□□ 1.25
CASD1Q96PB1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CASD1Q96PB1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CASD1Q96PB1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CASD1Q96PB1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.84■■□□□ 1.25
CASD1Q96PB1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
CASD1Q96PB1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CASD1Q96PB1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.83■■□□□ 1.25
CASD1Q96PB1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CASD1Q96PB1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.83■■□□□ 1.25
CASD1Q96PB1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.83■■□□□ 1.25
CASD1Q96PB1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
CASD1Q96PB1 AC008694.1-202ENST00000636953 945 ntBASIC22.83■■□□□ 1.25
CASD1Q96PB1 AC066615.1-201ENST00000640911 628 ntBASIC22.83■■□□□ 1.25
CASD1Q96PB1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CASD1Q96PB1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
CASD1Q96PB1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.82■■□□□ 1.24
CASD1Q96PB1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CASD1Q96PB1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CASD1Q96PB1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CASD1Q96PB1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
CASD1Q96PB1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.82■■□□□ 1.24
CASD1Q96PB1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CASD1Q96PB1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CASD1Q96PB1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.82■■□□□ 1.24
CASD1Q96PB1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.82■■□□□ 1.24
CASD1Q96PB1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CASD1Q96PB1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CASD1Q96PB1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CASD1Q96PB1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CASD1Q96PB1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.81■■□□□ 1.24
CASD1Q96PB1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
CASD1Q96PB1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CASD1Q96PB1 FAM201B-201ENST00000458407 597 ntBASIC22.81■■□□□ 1.24
CASD1Q96PB1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.81■■□□□ 1.24
CASD1Q96PB1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.81■■□□□ 1.24
CASD1Q96PB1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CASD1Q96PB1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
CASD1Q96PB1 KRT16P2-201ENST00000414673 1423 ntBASIC22.81■■□□□ 1.24
CASD1Q96PB1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CASD1Q96PB1 RBM17P2-201ENST00000616397 1405 ntBASIC22.81■■□□□ 1.24
CASD1Q96PB1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.81■■□□□ 1.24
CASD1Q96PB1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
CASD1Q96PB1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CASD1Q96PB1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CASD1Q96PB1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.8■■□□□ 1.24
CASD1Q96PB1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.8■■□□□ 1.24
CASD1Q96PB1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CASD1Q96PB1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.8■■□□□ 1.24
CASD1Q96PB1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms