Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.05■□□□□ 0.8
COL21A1Q96P44 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COL21A1Q96P44 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.04■□□□□ 0.8
COL21A1Q96P44 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.04■□□□□ 0.8
COL21A1Q96P44 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
COL21A1Q96P44 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL21A1Q96P44 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL21A1Q96P44 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.04■□□□□ 0.8
COL21A1Q96P44 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL21A1Q96P44 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL21A1Q96P44 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.04■□□□□ 0.8
COL21A1Q96P44 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.04■□□□□ 0.8
COL21A1Q96P44 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL21A1Q96P44 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL21A1Q96P44 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL21A1Q96P44 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL21A1Q96P44 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL21A1Q96P44 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COL21A1Q96P44 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL21A1Q96P44 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
COL21A1Q96P44 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL21A1Q96P44 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL21A1Q96P44 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL21A1Q96P44 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL21A1Q96P44 AC244015.2-201ENST00000616358 1861 ntBASIC20.03■□□□□ 0.8
COL21A1Q96P44 OXCT2P1-201ENST00000447263 1535 ntBASIC20.03■□□□□ 0.8
COL21A1Q96P44 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL21A1Q96P44 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
COL21A1Q96P44 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.03■□□□□ 0.8
COL21A1Q96P44 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
COL21A1Q96P44 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL21A1Q96P44 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.03■□□□□ 0.8
COL21A1Q96P44 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.03■□□□□ 0.8
COL21A1Q96P44 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.03■□□□□ 0.8
COL21A1Q96P44 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL21A1Q96P44 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL21A1Q96P44 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL21A1Q96P44 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
COL21A1Q96P44 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL21A1Q96P44 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COL21A1Q96P44 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL21A1Q96P44 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL21A1Q96P44 OR7E47P-201ENST00000546390 1422 ntBASIC20.02■□□□□ 0.8
COL21A1Q96P44 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL21A1Q96P44 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL21A1Q96P44 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL21A1Q96P44 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
COL21A1Q96P44 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COL21A1Q96P44 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL21A1Q96P44 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.02■□□□□ 0.8
COL21A1Q96P44 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.02■□□□□ 0.8
COL21A1Q96P44 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.02■□□□□ 0.8
COL21A1Q96P44 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
COL21A1Q96P44 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
COL21A1Q96P44 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL21A1Q96P44 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
COL21A1Q96P44 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL21A1Q96P44 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL21A1Q96P44 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.01■□□□□ 0.79
COL21A1Q96P44 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.01■□□□□ 0.79
COL21A1Q96P44 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
COL21A1Q96P44 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL21A1Q96P44 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL21A1Q96P44 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL21A1Q96P44 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL21A1Q96P44 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.01■□□□□ 0.79
COL21A1Q96P44 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.01■□□□□ 0.79
COL21A1Q96P44 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20■□□□□ 0.79
COL21A1Q96P44 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20■□□□□ 0.79
COL21A1Q96P44 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20■□□□□ 0.79
COL21A1Q96P44 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20■□□□□ 0.79
COL21A1Q96P44 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20■□□□□ 0.79
COL21A1Q96P44 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
COL21A1Q96P44 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20■□□□□ 0.79
COL21A1Q96P44 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL21A1Q96P44 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20■□□□□ 0.79
COL21A1Q96P44 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL21A1Q96P44 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
COL21A1Q96P44 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL21A1Q96P44 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL21A1Q96P44 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL21A1Q96P44 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.99■□□□□ 0.79
COL21A1Q96P44 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL21A1Q96P44 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms