Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 AF106564.1-201ENST00000607058 2553 ntBASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 AC244015.2-201ENST00000616358 1861 ntBASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 RASA4CP-201ENST00000424092 1398 ntBASIC19.02■□□□□ 0.64
FOXN4Q96NZ1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.63
FOXN4Q96NZ1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
FOXN4Q96NZ1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
FOXN4Q96NZ1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.02■□□□□ 0.63
FOXN4Q96NZ1 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
FOXN4Q96NZ1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN4Q96NZ1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN4Q96NZ1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN4Q96NZ1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN4Q96NZ1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
FOXN4Q96NZ1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN4Q96NZ1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN4Q96NZ1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
FOXN4Q96NZ1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19■□□□□ 0.63
FOXN4Q96NZ1 AP005435.1-201ENST00000529293 1178 ntBASIC19■□□□□ 0.63
FOXN4Q96NZ1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXN4Q96NZ1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19■□□□□ 0.63
FOXN4Q96NZ1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19■□□□□ 0.63
FOXN4Q96NZ1 AP004607.7-201ENST00000527152 1677 ntBASIC19■□□□□ 0.63
FOXN4Q96NZ1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN4Q96NZ1 Z98882.1-201ENST00000622160 2253 ntBASIC19■□□□□ 0.63
FOXN4Q96NZ1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN4Q96NZ1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXN4Q96NZ1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19■□□□□ 0.63
FOXN4Q96NZ1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19■□□□□ 0.63
FOXN4Q96NZ1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 AC027682.1-201ENST00000562846 899 ntBASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 AC126544.1-201ENST00000580842 1059 ntBASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN4Q96NZ1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 BX842568.3-201ENST00000418104 571 ntBASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN4Q96NZ1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms