Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 AC103834.1-201ENST00000520383 144 ntBASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 AC104564.3-201ENST00000582367 638 ntBASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP6Q96FZ7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 AC026471.6-201ENST00000622954 1905 ntBASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP6Q96FZ7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.34■■□□□ 1.01
CHMP6Q96FZ7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 AC103724.3-201ENST00000564481 992 ntBASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 AL031848.2-201ENST00000607670 837 ntBASIC21.33■■□□□ 1.01
CHMP6Q96FZ7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CHMP6Q96FZ7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHMP6Q96FZ7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHMP6Q96FZ7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHMP6Q96FZ7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP6Q96FZ7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.32■■□□□ 1
CHMP6Q96FZ7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP6Q96FZ7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.32■■□□□ 1
CHMP6Q96FZ7 AL049796.1-201ENST00000565336 1766 ntBASIC21.32■■□□□ 1
CHMP6Q96FZ7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHMP6Q96FZ7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHMP6Q96FZ7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.32■■□□□ 1
CHMP6Q96FZ7 AC004687.1-201ENST00000579003 1625 ntBASIC21.32■■□□□ 1
CHMP6Q96FZ7 AP005212.1-201ENST00000581547 1997 ntBASIC21.32■■□□□ 1
CHMP6Q96FZ7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP6Q96FZ7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHMP6Q96FZ7 AFG3L1P-217ENST00000557444 2447 ntBASIC21.31■■□□□ 1
CHMP6Q96FZ7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP6Q96FZ7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.31■■□□□ 1
CHMP6Q96FZ7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP6Q96FZ7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP6Q96FZ7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.31■■□□□ 1
CHMP6Q96FZ7 DUX4L4-201ENST00000566884 1269 ntBASIC21.31■■□□□ 1
CHMP6Q96FZ7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.31■■□□□ 1
CHMP6Q96FZ7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP6Q96FZ7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP6Q96FZ7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP6Q96FZ7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CHMP6Q96FZ7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP6Q96FZ7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP6Q96FZ7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP6Q96FZ7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP6Q96FZ7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP6Q96FZ7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms