Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 AC120498.10-201ENST00000621827 505 ntBASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 MYC-209ENST00000641252 345 ntBASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.22■□□□□ 0.67
SNRNP40Q96DI7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 GCSHP5-201ENST00000443090 522 ntBASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP40Q96DI7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 AC008175.2-201ENST00000612840 297 ntBASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.2■□□□□ 0.66
SNRNP40Q96DI7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP40Q96DI7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP40Q96DI7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP40Q96DI7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP40Q96DI7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP40Q96DI7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP40Q96DI7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.19■□□□□ 0.66
SNRNP40Q96DI7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.19■□□□□ 0.66
SNRNP40Q96DI7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP40Q96DI7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.19■□□□□ 0.66
SNRNP40Q96DI7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP40Q96DI7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.19■□□□□ 0.66
SNRNP40Q96DI7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 AC091874.3-201ENST00000512672 1195 ntBASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SNRNP40Q96DI7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 AL158047.1-201ENST00000445918 881 ntBASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 AC006058.3-201ENST00000606217 1069 ntBASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP40Q96DI7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms