Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.61■□□□□ 0.89
TUBGCP3Q96CW5 GUSBP5-201ENST00000418136 578 ntBASIC20.61■□□□□ 0.89
TUBGCP3Q96CW5 OXCT2P1-201ENST00000447263 1535 ntBASIC20.61■□□□□ 0.89
TUBGCP3Q96CW5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.61■□□□□ 0.89
TUBGCP3Q96CW5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TUBGCP3Q96CW5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.61■□□□□ 0.89
TUBGCP3Q96CW5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TUBGCP3Q96CW5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBGCP3Q96CW5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.59■□□□□ 0.89
TUBGCP3Q96CW5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBGCP3Q96CW5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBGCP3Q96CW5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
TUBGCP3Q96CW5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBGCP3Q96CW5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBGCP3Q96CW5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TUBGCP3Q96CW5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.59■□□□□ 0.89
TUBGCP3Q96CW5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBGCP3Q96CW5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBGCP3Q96CW5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.58■□□□□ 0.89
TUBGCP3Q96CW5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TUBGCP3Q96CW5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TUBGCP3Q96CW5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.58■□□□□ 0.89
TUBGCP3Q96CW5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.58■□□□□ 0.89
TUBGCP3Q96CW5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TUBGCP3Q96CW5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.58■□□□□ 0.89
TUBGCP3Q96CW5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TUBGCP3Q96CW5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TUBGCP3Q96CW5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.58■□□□□ 0.88
TUBGCP3Q96CW5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TUBGCP3Q96CW5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TUBGCP3Q96CW5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TUBGCP3Q96CW5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBGCP3Q96CW5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 AL034346.1-201ENST00000568244 1277 ntBASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 AL512631.2-201ENST00000604634 923 ntBASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TUBGCP3Q96CW5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBGCP3Q96CW5 SLC25A24-204ENST00000569674 2357 ntBASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms