Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 FAM99A-202ENST00000538190 1989 ntBASIC18.86■□□□□ 0.61
APH1AQ96BI3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
APH1AQ96BI3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APH1AQ96BI3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APH1AQ96BI3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.86■□□□□ 0.61
APH1AQ96BI3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APH1AQ96BI3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.85■□□□□ 0.61
APH1AQ96BI3 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.85■□□□□ 0.61
APH1AQ96BI3 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.85■□□□□ 0.61
APH1AQ96BI3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.85■□□□□ 0.61
APH1AQ96BI3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
APH1AQ96BI3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.85■□□□□ 0.61
APH1AQ96BI3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
APH1AQ96BI3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
APH1AQ96BI3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
APH1AQ96BI3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.85■□□□□ 0.61
APH1AQ96BI3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APH1AQ96BI3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
APH1AQ96BI3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.84■□□□□ 0.61
APH1AQ96BI3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APH1AQ96BI3 AC004854.2-201ENST00000608450 1441 ntBASIC18.84■□□□□ 0.61
APH1AQ96BI3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
APH1AQ96BI3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
APH1AQ96BI3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.84■□□□□ 0.61
APH1AQ96BI3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
APH1AQ96BI3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.84■□□□□ 0.61
APH1AQ96BI3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APH1AQ96BI3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.84■□□□□ 0.61
APH1AQ96BI3 AC104564.3-201ENST00000582367 638 ntBASIC18.84■□□□□ 0.61
APH1AQ96BI3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
APH1AQ96BI3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.84■□□□□ 0.61
APH1AQ96BI3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.84■□□□□ 0.61
APH1AQ96BI3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
APH1AQ96BI3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
APH1AQ96BI3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
APH1AQ96BI3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
APH1AQ96BI3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APH1AQ96BI3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APH1AQ96BI3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
APH1AQ96BI3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APH1AQ96BI3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
APH1AQ96BI3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APH1AQ96BI3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
APH1AQ96BI3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APH1AQ96BI3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
APH1AQ96BI3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APH1AQ96BI3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
APH1AQ96BI3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APH1AQ96BI3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.83■□□□□ 0.6
APH1AQ96BI3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APH1AQ96BI3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APH1AQ96BI3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APH1AQ96BI3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APH1AQ96BI3 AP004607.4-201ENST00000530158 1459 ntBASIC18.83■□□□□ 0.6
APH1AQ96BI3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
APH1AQ96BI3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
APH1AQ96BI3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.82■□□□□ 0.6
APH1AQ96BI3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APH1AQ96BI3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APH1AQ96BI3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APH1AQ96BI3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1AQ96BI3 KRT19P1-201ENST00000405746 1186 ntBASIC18.82■□□□□ 0.6
APH1AQ96BI3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.82■□□□□ 0.6
APH1AQ96BI3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.82■□□□□ 0.6
APH1AQ96BI3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.82■□□□□ 0.6
APH1AQ96BI3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.82■□□□□ 0.6
APH1AQ96BI3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1AQ96BI3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1AQ96BI3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1AQ96BI3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
APH1AQ96BI3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1AQ96BI3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1AQ96BI3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
APH1AQ96BI3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1AQ96BI3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1AQ96BI3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APH1AQ96BI3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.81■□□□□ 0.6
APH1AQ96BI3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APH1AQ96BI3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
APH1AQ96BI3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APH1AQ96BI3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
APH1AQ96BI3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
APH1AQ96BI3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.81■□□□□ 0.6
APH1AQ96BI3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
APH1AQ96BI3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APH1AQ96BI3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APH1AQ96BI3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.81■□□□□ 0.6
APH1AQ96BI3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.81■□□□□ 0.6
APH1AQ96BI3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APH1AQ96BI3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APH1AQ96BI3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APH1AQ96BI3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APH1AQ96BI3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APH1AQ96BI3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APH1AQ96BI3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APH1AQ96BI3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APH1AQ96BI3 AC104187.1-201ENST00000607510 612 ntBASIC18.8■□□□□ 0.6
APH1AQ96BI3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APH1AQ96BI3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APH1AQ96BI3 AC003102.1-202ENST00000563394 1796 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms