Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HPS1Q92902 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HPS1Q92902 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.26■□□□□ 0.67
HPS1Q92902 ALDH1A3-203ENST00000557963 1670 ntBASIC19.26■□□□□ 0.67
HPS1Q92902 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS1Q92902 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS1Q92902 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.25■□□□□ 0.67
HPS1Q92902 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HPS1Q92902 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS1Q92902 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS1Q92902 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HPS1Q92902 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.25■□□□□ 0.67
HPS1Q92902 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS1Q92902 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.25■□□□□ 0.67
HPS1Q92902 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS1Q92902 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HPS1Q92902 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS1Q92902 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS1Q92902 SRD5A1P1-201ENST00000442297 786 ntBASIC19.24■□□□□ 0.67
HPS1Q92902 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.24■□□□□ 0.67
HPS1Q92902 AC106739.1-201ENST00000617035 715 ntBASIC19.24■□□□□ 0.67
HPS1Q92902 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS1Q92902 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS1Q92902 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS1Q92902 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS1Q92902 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HPS1Q92902 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
HPS1Q92902 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HPS1Q92902 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS1Q92902 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS1Q92902 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS1Q92902 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HPS1Q92902 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS1Q92902 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS1Q92902 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS1Q92902 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HPS1Q92902 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.23■□□□□ 0.67
HPS1Q92902 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.23■□□□□ 0.67
HPS1Q92902 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS1Q92902 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS1Q92902 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.23■□□□□ 0.67
HPS1Q92902 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS1Q92902 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HPS1Q92902 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS1Q92902 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS1Q92902 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.22■□□□□ 0.67
HPS1Q92902 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS1Q92902 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS1Q92902 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.22■□□□□ 0.67
HPS1Q92902 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.22■□□□□ 0.67
HPS1Q92902 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.22■□□□□ 0.67
HPS1Q92902 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.22■□□□□ 0.67
HPS1Q92902 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS1Q92902 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS1Q92902 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HPS1Q92902 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HPS1Q92902 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.22■□□□□ 0.67
HPS1Q92902 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
HPS1Q92902 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS1Q92902 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS1Q92902 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HPS1Q92902 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.21■□□□□ 0.67
HPS1Q92902 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS1Q92902 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HPS1Q92902 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HPS1Q92902 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.21■□□□□ 0.67
HPS1Q92902 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HPS1Q92902 PBX2P1-201ENST00000493219 1291 ntBASIC19.21■□□□□ 0.67
HPS1Q92902 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HPS1Q92902 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS1Q92902 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HPS1Q92902 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS1Q92902 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS1Q92902 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.21■□□□□ 0.66
HPS1Q92902 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS1Q92902 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS1Q92902 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
HPS1Q92902 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.2■□□□□ 0.66
HPS1Q92902 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS1Q92902 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HPS1Q92902 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.2■□□□□ 0.66
HPS1Q92902 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HPS1Q92902 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.2■□□□□ 0.66
HPS1Q92902 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPS1Q92902 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS1Q92902 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HPS1Q92902 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS1Q92902 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms