Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.88■□□□□ 0.61
CNEP1R1Q8N9A8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNEP1R1Q8N9A8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.88■□□□□ 0.61
CNEP1R1Q8N9A8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNEP1R1Q8N9A8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CNEP1R1Q8N9A8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.88■□□□□ 0.61
CNEP1R1Q8N9A8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNEP1R1Q8N9A8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CNEP1R1Q8N9A8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNEP1R1Q8N9A8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNEP1R1Q8N9A8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNEP1R1Q8N9A8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 AC026185.1-201ENST00000445748 174 ntBASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNEP1R1Q8N9A8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 AC080038.3-201ENST00000623346 1952 ntBASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNEP1R1Q8N9A8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 AC006970.2-201ENST00000450065 779 ntBASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 AC010141.2-201ENST00000452426 721 ntBASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 AC138907.5-202ENST00000569484 235 ntBASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 MFSD11-216ENST00000590393 1141 ntBASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CNEP1R1Q8N9A8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 ID1-201ENST00000376105 1233 ntBASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 MYCNOS-205ENST00000641950 531 ntBASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNEP1R1Q8N9A8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNEP1R1Q8N9A8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.83■□□□□ 0.61
CNEP1R1Q8N9A8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNEP1R1Q8N9A8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNEP1R1Q8N9A8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms