Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 AC003102.1-202ENST00000563394 1796 ntBASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LSMEM1Q8N8F7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 AP006587.3-201ENST00000525742 1516 ntBASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 AL137060.1-201ENST00000618151 2648 ntBASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 AC099791.1-201ENST00000416440 715 ntBASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 AC008764.7-201ENST00000593779 1081 ntBASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSMEM1Q8N8F7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.45■□□□□ 0.7
LSMEM1Q8N8F7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSMEM1Q8N8F7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSMEM1Q8N8F7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
LSMEM1Q8N8F7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSMEM1Q8N8F7 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.45■□□□□ 0.7
LSMEM1Q8N8F7 AC110285.6-201ENST00000617652 491 ntBASIC19.45■□□□□ 0.7
LSMEM1Q8N8F7 AL355001.2-201ENST00000620617 1191 ntBASIC19.45■□□□□ 0.7
LSMEM1Q8N8F7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSMEM1Q8N8F7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSMEM1Q8N8F7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 AP001330.3-201ENST00000520123 633 ntBASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.44■□□□□ 0.7
LSMEM1Q8N8F7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSMEM1Q8N8F7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 RASA4CP-201ENST00000424092 1398 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms