Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TRAM1L1Q8N609 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.08■□□□□ 0.97
TRAM1L1Q8N609 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRAM1L1Q8N609 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAM1L1Q8N609 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.08■□□□□ 0.97
TRAM1L1Q8N609 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
TRAM1L1Q8N609 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAM1L1Q8N609 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAM1L1Q8N609 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAM1L1Q8N609 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.08■□□□□ 0.96
TRAM1L1Q8N609 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRAM1L1Q8N609 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAM1L1Q8N609 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 KRT19P1-201ENST00000405746 1186 ntBASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 AC104564.3-201ENST00000582367 638 ntBASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 AC104187.1-201ENST00000607510 612 ntBASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAM1L1Q8N609 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAM1L1Q8N609 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
TRAM1L1Q8N609 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 AC138907.5-202ENST00000569484 235 ntBASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAM1L1Q8N609 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms