Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF39Q8N4T4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF39Q8N4T4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF39Q8N4T4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.16■□□□□ 0.82
ARHGEF39Q8N4T4 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.16■□□□□ 0.82
ARHGEF39Q8N4T4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.16■□□□□ 0.82
ARHGEF39Q8N4T4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.16■□□□□ 0.82
ARHGEF39Q8N4T4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF39Q8N4T4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF39Q8N4T4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF39Q8N4T4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
ARHGEF39Q8N4T4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGEF39Q8N4T4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGEF39Q8N4T4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGEF39Q8N4T4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGEF39Q8N4T4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGEF39Q8N4T4 AC010141.2-201ENST00000452426 721 ntBASIC20.14■□□□□ 0.81
ARHGEF39Q8N4T4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.14■□□□□ 0.81
ARHGEF39Q8N4T4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.14■□□□□ 0.81
ARHGEF39Q8N4T4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ARHGEF39Q8N4T4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ARHGEF39Q8N4T4 C11orf96-202ENST00000528572 1834 ntBASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 AP001160.3-201ENST00000601484 763 ntBASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 EP400NL-214ENST00000641289 2402 ntBASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.13■□□□□ 0.81
ARHGEF39Q8N4T4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
ARHGEF39Q8N4T4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF39Q8N4T4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.11■□□□□ 0.81
ARHGEF39Q8N4T4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF39Q8N4T4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.11■□□□□ 0.81
ARHGEF39Q8N4T4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.11■□□□□ 0.81
ARHGEF39Q8N4T4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.11■□□□□ 0.81
ARHGEF39Q8N4T4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.11■□□□□ 0.81
ARHGEF39Q8N4T4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF39Q8N4T4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF39Q8N4T4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF39Q8N4T4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARHGEF39Q8N4T4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 AC137761.2-201ENST00000561729 223 ntBASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 AC145350.3-201ENST00000569033 163 ntBASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 AL137784.2-201ENST00000607332 1000 ntBASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms