Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
SMC5Q8IY18 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMC5Q8IY18 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SMC5Q8IY18 AC027682.1-201ENST00000562846 899 ntBASIC26.43■■□□□ 1.82
SMC5Q8IY18 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
SMC5Q8IY18 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC26.43■■□□□ 1.82
SMC5Q8IY18 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMC5Q8IY18 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.43■■□□□ 1.82
SMC5Q8IY18 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMC5Q8IY18 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMC5Q8IY18 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SMC5Q8IY18 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMC5Q8IY18 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SMC5Q8IY18 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC26.42■■□□□ 1.82
SMC5Q8IY18 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMC5Q8IY18 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMC5Q8IY18 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMC5Q8IY18 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SMC5Q8IY18 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SMC5Q8IY18 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SMC5Q8IY18 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SMC5Q8IY18 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SMC5Q8IY18 MIR939-201ENST00000401314 82 ntBASIC26.41■■□□□ 1.82
SMC5Q8IY18 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.41■■□□□ 1.82
SMC5Q8IY18 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.41■■□□□ 1.82
SMC5Q8IY18 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.41■■□□□ 1.82
SMC5Q8IY18 AC055733.4-201ENST00000638462 1354 ntBASIC26.41■■□□□ 1.82
SMC5Q8IY18 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SMC5Q8IY18 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
SMC5Q8IY18 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SMC5Q8IY18 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SMC5Q8IY18 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMC5Q8IY18 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
SMC5Q8IY18 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SMC5Q8IY18 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SMC5Q8IY18 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SMC5Q8IY18 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMC5Q8IY18 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
SMC5Q8IY18 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC26.4■■□□□ 1.82
SMC5Q8IY18 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
SMC5Q8IY18 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.4■■□□□ 1.82
SMC5Q8IY18 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SMC5Q8IY18 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMC5Q8IY18 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC26.4■■□□□ 1.82
SMC5Q8IY18 TSPY26P-201ENST00000476365 1326 ntBASIC26.39■■□□□ 1.82
SMC5Q8IY18 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SMC5Q8IY18 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SMC5Q8IY18 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SMC5Q8IY18 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC26.39■■□□□ 1.82
SMC5Q8IY18 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SMC5Q8IY18 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.39■■□□□ 1.82
SMC5Q8IY18 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.39■■□□□ 1.82
SMC5Q8IY18 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SMC5Q8IY18 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SMC5Q8IY18 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC26.39■■□□□ 1.81
SMC5Q8IY18 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SMC5Q8IY18 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
SMC5Q8IY18 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
SMC5Q8IY18 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMC5Q8IY18 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.38■■□□□ 1.81
SMC5Q8IY18 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.38■■□□□ 1.81
SMC5Q8IY18 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SMC5Q8IY18 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.38■■□□□ 1.81
SMC5Q8IY18 AL355001.2-201ENST00000620617 1191 ntBASIC26.38■■□□□ 1.81
SMC5Q8IY18 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMC5Q8IY18 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMC5Q8IY18 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
SMC5Q8IY18 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMC5Q8IY18 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMC5Q8IY18 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMC5Q8IY18 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SMC5Q8IY18 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SMC5Q8IY18 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SMC5Q8IY18 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMC5Q8IY18 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SMC5Q8IY18 AL136967.2-201ENST00000623968 743 ntBASIC26.37■■□□□ 1.81
SMC5Q8IY18 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SMC5Q8IY18 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMC5Q8IY18 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SMC5Q8IY18 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMC5Q8IY18 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMC5Q8IY18 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMC5Q8IY18 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SMC5Q8IY18 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMC5Q8IY18 RASA4CP-201ENST00000424092 1398 ntBASIC26.36■■□□□ 1.81
SMC5Q8IY18 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.36■■□□□ 1.81
SMC5Q8IY18 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMC5Q8IY18 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMC5Q8IY18 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.36■■□□□ 1.81
SMC5Q8IY18 AF213884.3-201ENST00000563833 479 ntBASIC26.36■■□□□ 1.81
SMC5Q8IY18 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SMC5Q8IY18 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
SMC5Q8IY18 AC009237.3-201ENST00000393279 1427 ntBASIC26.36■■□□□ 1.81
SMC5Q8IY18 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SMC5Q8IY18 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SMC5Q8IY18 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMC5Q8IY18 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SMC5Q8IY18 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC26.35■■□□□ 1.81
SMC5Q8IY18 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMC5Q8IY18 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms