Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 AC053503.5-201ENST00000601508 636 ntBASIC23.78■■□□□ 1.4
TRIM50Q86XT4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 AC080038.3-201ENST00000623346 1952 ntBASIC23.78■■□□□ 1.4
TRIM50Q86XT4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM50Q86XT4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM50Q86XT4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM50Q86XT4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.77■■□□□ 1.4
TRIM50Q86XT4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM50Q86XT4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM50Q86XT4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.77■■□□□ 1.4
TRIM50Q86XT4 AC010536.3-201ENST00000620306 533 ntBASIC23.77■■□□□ 1.4
TRIM50Q86XT4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM50Q86XT4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.77■■□□□ 1.4
TRIM50Q86XT4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM50Q86XT4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM50Q86XT4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM50Q86XT4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM50Q86XT4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TRIM50Q86XT4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM50Q86XT4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM50Q86XT4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM50Q86XT4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM50Q86XT4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TRIM50Q86XT4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM50Q86XT4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM50Q86XT4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM50Q86XT4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM50Q86XT4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.75■■□□□ 1.39
TRIM50Q86XT4 KRT18P20-201ENST00000548986 1279 ntBASIC23.75■■□□□ 1.39
TRIM50Q86XT4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.75■■□□□ 1.39
TRIM50Q86XT4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.75■■□□□ 1.39
TRIM50Q86XT4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM50Q86XT4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.75■■□□□ 1.39
TRIM50Q86XT4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
TRIM50Q86XT4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 GUSBP6-202ENST00000438529 1198 ntBASIC23.74■■□□□ 1.39
TRIM50Q86XT4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 AC083906.2-201ENST00000511578 360 ntBASIC23.74■■□□□ 1.39
TRIM50Q86XT4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM50Q86XT4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 AL121832.2-201ENST00000610979 668 ntBASIC23.73■■□□□ 1.39
TRIM50Q86XT4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM50Q86XT4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM50Q86XT4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM50Q86XT4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM50Q86XT4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM50Q86XT4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM50Q86XT4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM50Q86XT4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM50Q86XT4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM50Q86XT4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM50Q86XT4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM50Q86XT4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM50Q86XT4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
TRIM50Q86XT4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM50Q86XT4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.71■■□□□ 1.39
TRIM50Q86XT4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM50Q86XT4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM50Q86XT4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM50Q86XT4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.71■■□□□ 1.39
TRIM50Q86XT4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM50Q86XT4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM50Q86XT4 TSPY6P-201ENST00000448518 926 ntBASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms