Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF546Q86UE3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF546Q86UE3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
ZNF546Q86UE3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF546Q86UE3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 SPCS2P3-201ENST00000500401 656 ntBASIC17.64■□□□□ 0.41
ZNF546Q86UE3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF546Q86UE3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 RNF126P1-201ENST00000567452 1320 ntBASIC17.63■□□□□ 0.41
ZNF546Q86UE3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF546Q86UE3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ZNF546Q86UE3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 LONRF2P2-201ENST00000439212 571 ntBASIC17.61■□□□□ 0.41
ZNF546Q86UE3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF546Q86UE3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 DUX4L9-201ENST00000449051 1259 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms