Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 SAT1-207ENST00000474223 1033 ntTSL 214.65□□□□□ -0.062e-12■■□□□ 13.7
PABPN1Q86U42 SAT1-205ENST00000462639 826 ntTSL 213.55□□□□□ -0.242e-12■■□□□ 13.7
PABPN1Q86U42 SAT1-206ENST00000463236 735 ntTSL 311.93□□□□□ -0.52e-12■■□□□ 13.7
PABPN1Q86U42 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.917e-7■■□□□ 13.7
PABPN1Q86U42 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC8.24□□□□□ -1.097e-7■■□□□ 13.7
PABPN1Q86U42 SRSF11-214ENST00000484162 4008 ntTSL 1 (best)8.22□□□□□ -1.097e-7■■□□□ 13.7
PABPN1Q86U42 ARAP1-218ENST00000543868 507 ntTSL 231.19■■■□□ 2.584e-7■■□□□ 13.7
PABPN1Q86U42 ARAP1-220ENST00000544958 473 ntTSL 327.61■■■□□ 2.014e-7■■□□□ 13.7
PABPN1Q86U42 SLC25A39-210ENST00000588315 1409 ntTSL 240.25■■■■■ 4.031e-6■■□□□ 13.7
PABPN1Q86U42 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC45.44■■■■■ 4.862e-6■■□□□ 13.7
PABPN1Q86U42 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC43.43■■■■■ 4.542e-6■■□□□ 13.7
PABPN1Q86U42 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC43.43■■■■■ 4.542e-6■■□□□ 13.7
PABPN1Q86U42 STOML2-204ENST00000488050 904 ntTSL 520.77■□□□□ 0.922e-6■■□□□ 13.7
PABPN1Q86U42 INTS11-230ENST00000526332 579 ntTSL 436.81■■■■□ 3.486e-10■■□□□ 13.7
PABPN1Q86U42 INTS11-218ENST00000488042 1134 ntTSL 234.14■■■■□ 3.066e-10■■□□□ 13.7
PABPN1Q86U42 INTS11-206ENST00000430786 849 ntTSL 534.02■■■■□ 3.046e-10■■□□□ 13.7
PABPN1Q86U42 INTS11-240ENST00000531020 548 ntTSL 430.08■■■□□ 2.416e-10■■□□□ 13.7
PABPN1Q86U42 INTS11-231ENST00000526797 659 ntTSL 427.91■■■□□ 2.066e-10■■□□□ 13.7
PABPN1Q86U42 INTS11-245ENST00000533916 405 ntTSL 223.25■■□□□ 1.316e-10■■□□□ 13.7
PABPN1Q86U42 CYTH2-212ENST00000600597 293 ntTSL 514.18□□□□□ -0.146e-10■■□□□ 13.7
PABPN1Q86U42 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC6.36□□□□□ -1.396e-10■■□□□ 13.7
PABPN1Q86U42 PUF60-207ENST00000526459 1003 ntTSL 231.28■■■□□ 2.62e-7■■□□□ 13.7
PABPN1Q86U42 PUF60-211ENST00000527744 1007 ntTSL 228.3■■■□□ 2.122e-7■■□□□ 13.7
PABPN1Q86U42 COPG1-209ENST00000514478 734 ntTSL 316.35■□□□□ 0.212e-9■■□□□ 13.7
PABPN1Q86U42 COPG1-205ENST00000509889 599 ntTSL 516.3■□□□□ 0.22e-9■■□□□ 13.7
PABPN1Q86U42 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.055e-7■■□□□ 13.7
PABPN1Q86U42 SEC31A-216ENST00000505479 631 ntTSL 211.73□□□□□ -0.535e-7■■□□□ 13.7
PABPN1Q86U42 SEC31A-240ENST00000515062 597 ntTSL 311.13□□□□□ -0.635e-7■■□□□ 13.7
PABPN1Q86U42 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC9.48□□□□□ -0.895e-7■■□□□ 13.7
PABPN1Q86U42 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC8.13□□□□□ -1.115e-7■■□□□ 13.7
PABPN1Q86U42 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.99□□□□□ -1.295e-7■■□□□ 13.7
PABPN1Q86U42 NECAB3-209ENST00000483813 1277 ntTSL 539.59■■■■□ 3.936e-8■■□□□ 13.7
PABPN1Q86U42 COL6A1-206ENST00000498614 2358 ntTSL 1 (best)27.48■■□□□ 1.991e-11■■□□□ 13.7
PABPN1Q86U42 MYBBP1A-205ENST00000571368 1995 ntTSL 230.94■■■□□ 2.542e-7■■□□□ 13.7
PABPN1Q86U42 UBR4-214ENST00000486515 536 ntTSL 313.78□□□□□ -0.25e-8■■□□□ 13.6
PABPN1Q86U42 ABCA7-212ENST00000530092 571 ntTSL 437.15■■■■□ 3.541e-6■■□□□ 13.6
PABPN1Q86U42 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC15.61■□□□□ 0.091e-6■■□□□ 13.6
PABPN1Q86U42 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.675e-8■■□□□ 13.6
PABPN1Q86U42 CDK18-205ENST00000459862 716 ntTSL 228.09■■■□□ 2.099e-7■■□□□ 13.6
PABPN1Q86U42 HSPG2-211ENST00000486901 3586 ntTSL 218.52■□□□□ 0.562e-6■■□□□ 13.6
PABPN1Q86U42 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.72e-6■■□□□ 13.6
PABPN1Q86U42 EIF2B4-203ENST00000417567 761 ntTSL 539.4■■■■□ 3.93e-6■■□□□ 13.6
PABPN1Q86U42 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.375e-12■■□□□ 13.6
PABPN1Q86U42 EIF2B4-208ENST00000475582 4293 ntTSL 516■□□□□ 0.153e-6■■□□□ 13.6
PABPN1Q86U42 CEP250-204ENST00000422671 2648 ntTSL 524.6■■□□□ 1.537e-7■■□□□ 13.6
PABPN1Q86U42 SSBP4-214ENST00000607020 504 ntTSL 332.39■■■□□ 2.782e-7■■□□□ 13.6
PABPN1Q86U42 NT5C-202ENST00000577523 776 ntTSL 246.54■■■■■ 5.047e-9■■□□□ 13.6
PABPN1Q86U42 NT5C-213ENST00000583655 1315 ntTSL 244.07■■■■■ 4.657e-9■■□□□ 13.6
PABPN1Q86U42 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC43.88■■■■■ 4.627e-9■■□□□ 13.6
PABPN1Q86U42 NT5C-209ENST00000580758 958 ntTSL 238.48■■■■□ 3.757e-9■■□□□ 13.6
PABPN1Q86U42 NT5C-214ENST00000584352 503 ntTSL 237.59■■■■□ 3.617e-9■■□□□ 13.6
PABPN1Q86U42 NT5C-205ENST00000578407 720 ntTSL 337.47■■■■□ 3.597e-9■■□□□ 13.6
PABPN1Q86U42 NT5C-210ENST00000582160 860 ntTSL 2 BASIC37.01■■■■□ 3.527e-9■■□□□ 13.6
PABPN1Q86U42 NT5C-208ENST00000580423 450 ntTSL 234.3■■■■□ 3.087e-9■■□□□ 13.6
PABPN1Q86U42 NT5C-212ENST00000582744 921 ntTSL 233.44■■■□□ 2.947e-9■■□□□ 13.6
PABPN1Q86U42 SNRNP200-208ENST00000497539 2666 ntTSL 1 (best)19.28■□□□□ 0.686e-7■■□□□ 13.6
PABPN1Q86U42 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.086e-7■■□□□ 13.6
PABPN1Q86U42 SLC17A9-204ENST00000459704 2015 ntTSL 328.7■■■□□ 2.193e-8■■□□□ 13.6
PABPN1Q86U42 SLC17A9-205ENST00000483113 1624 ntTSL 328.19■■■□□ 2.13e-8■■□□□ 13.6
PABPN1Q86U42 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.473e-7■■□□□ 13.6
PABPN1Q86U42 IFT172-206ENST00000450564 760 ntTSL 338.6■■■■□ 3.772e-6■■□□□ 13.6
PABPN1Q86U42 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.591e-6■■□□□ 13.6
PABPN1Q86U42 CDK18-211ENST00000489617 3190 ntTSL 1 (best)19.99■□□□□ 0.791e-6■■□□□ 13.6
PABPN1Q86U42 CDK18-222ENST00000515494 3756 ntTSL 1 (best)18.25■□□□□ 0.511e-6■■□□□ 13.6
PABPN1Q86U42 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC39.89■■■■□ 3.986e-9■■□□□ 13.6
PABPN1Q86U42 ASPSCR1-219ENST00000584454 1919 ntTSL 1 (best)39.51■■■■□ 3.926e-9■■□□□ 13.6
PABPN1Q86U42 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC38.08■■■■□ 3.696e-9■■□□□ 13.6
PABPN1Q86U42 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC37.13■■■■□ 3.546e-9■■□□□ 13.6
PABPN1Q86U42 ILF3-220ENST00000590869 531 ntTSL 527.68■■■□□ 2.022e-7■■□□□ 13.6
PABPN1Q86U42 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC49.58■■■■■ 5.534e-8■■□□□ 13.6
PABPN1Q86U42 SLC2A4RG-207ENST00000493772 1328 ntTSL 1 (best)42.36■■■■■ 4.374e-8■■□□□ 13.6
PABPN1Q86U42 SLC2A4RG-202ENST00000473157 991 ntTSL 337.77■■■■□ 3.644e-8■■□□□ 13.6
PABPN1Q86U42 HGS-206ENST00000571647 2401 nt25.18■■□□□ 1.628e-7■■□□□ 13.6
PABPN1Q86U42 QARS-251ENST00000637543 2074 ntTSL 521.57■■□□□ 1.049e-7■■□□□ 13.6
PABPN1Q86U42 GGA1-218ENST00000475445 2614 ntTSL 223.43■■□□□ 1.348e-8■■□□□ 13.6
PABPN1Q86U42 MST1-218ENST00000494809 859 ntTSL 332.62■■■□□ 2.812e-8■■□□□ 13.6
PABPN1Q86U42 SLC25A39-206ENST00000585695 1121 ntTSL 246.1■■■■■ 4.971e-6■■□□□ 13.6
PABPN1Q86U42 RABL6-210ENST00000484471 2746 ntTSL 530.18■■■□□ 2.423e-7■■□□□ 13.5
PABPN1Q86U42 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.063e-7■■□□□ 13.5
PABPN1Q86U42 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.913e-7■■□□□ 13.5
PABPN1Q86U42 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC33.21■■■□□ 2.915e-8■■□□□ 13.5
PABPN1Q86U42 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC29.62■■■□□ 2.335e-8■■□□□ 13.5
PABPN1Q86U42 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.65e-8■■□□□ 13.5
PABPN1Q86U42 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC22.91■■□□□ 1.265e-8■■□□□ 13.5
PABPN1Q86U42 GSTK1-204ENST00000442394 2219 ntTSL 516.78■□□□□ 0.285e-8■■□□□ 13.5
PABPN1Q86U42 GSTK1-206ENST00000473649 2692 ntTSL 216.66■□□□□ 0.265e-8■■□□□ 13.5
PABPN1Q86U42 CCNL2-208ENST00000469113 707 ntTSL 329■■■□□ 2.231e-15■■□□□ 13.5
PABPN1Q86U42 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.82e-6■■□□□ 13.5
PABPN1Q86U42 CEP164-213ENST00000533706 5035 ntTSL 519.38■□□□□ 0.692e-6■■□□□ 13.5
PABPN1Q86U42 CEP164-212ENST00000533675 4761 ntTSL 218.26■□□□□ 0.512e-6■■□□□ 13.5
PABPN1Q86U42 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.083e-7■■□□□ 13.5
PABPN1Q86U42 HDAC6-215ENST00000465457 563 ntTSL 529.34■■■□□ 2.293e-7■■□□□ 13.5
PABPN1Q86U42 PILRB-204ENST00000438028 1822 ntTSL 1 (best)36.78■■■■□ 3.485e-7■■□□□ 13.5
PABPN1Q86U42 PILRB-206ENST00000443526 1364 ntTSL 1 (best)34.11■■■■□ 3.055e-7■■□□□ 13.5
PABPN1Q86U42 PILRB-202ENST00000422808 1599 ntTSL 1 (best)33.39■■■□□ 2.945e-7■■□□□ 13.5
PABPN1Q86U42 PILRB-201ENST00000419749 1506 ntTSL 1 (best)32.51■■■□□ 2.795e-7■■□□□ 13.5
PABPN1Q86U42 PILRB-210ENST00000457519 2074 ntTSL 1 (best)30.58■■■□□ 2.495e-7■■□□□ 13.5
PABPN1Q86U42 ACAD11-201ENST00000264990 4142 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.651e-8■■□□□ 13.5
PABPN1Q86U42 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC18.25■□□□□ 0.511e-8■■□□□ 13.5
PABPN1Q86U42 ACAD11-208ENST00000496418 3684 ntTSL 28.7□□□□□ -1.021e-8■■□□□ 13.5
Retrieved 100 of 8,254 protein–RNA pairs in 331.1 ms