Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
DENND4AQ7Z401 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DENND4AQ7Z401 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DENND4AQ7Z401 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DENND4AQ7Z401 KRT16P2-201ENST00000414673 1423 ntBASIC22.13■■□□□ 1.13
DENND4AQ7Z401 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.13■■□□□ 1.13
DENND4AQ7Z401 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
DENND4AQ7Z401 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.13■■□□□ 1.13
DENND4AQ7Z401 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.13■■□□□ 1.13
DENND4AQ7Z401 AC006058.3-201ENST00000606217 1069 ntBASIC22.13■■□□□ 1.13
DENND4AQ7Z401 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DENND4AQ7Z401 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
DENND4AQ7Z401 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DENND4AQ7Z401 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
DENND4AQ7Z401 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.12■■□□□ 1.13
DENND4AQ7Z401 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.12■■□□□ 1.13
DENND4AQ7Z401 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DENND4AQ7Z401 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.12■■□□□ 1.13
DENND4AQ7Z401 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DENND4AQ7Z401 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.12■■□□□ 1.13
DENND4AQ7Z401 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 AC097658.1-201ENST00000475555 843 ntBASIC22.11■■□□□ 1.13
DENND4AQ7Z401 AP003097.1-201ENST00000530657 1135 ntBASIC22.11■■□□□ 1.13
DENND4AQ7Z401 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 ANOS2P-203ENST00000472227 1816 ntBASIC22.11■■□□□ 1.13
DENND4AQ7Z401 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.11■■□□□ 1.13
DENND4AQ7Z401 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DENND4AQ7Z401 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DENND4AQ7Z401 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
DENND4AQ7Z401 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.1■■□□□ 1.13
DENND4AQ7Z401 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.1■■□□□ 1.13
DENND4AQ7Z401 AC008694.1-202ENST00000636953 945 ntBASIC22.1■■□□□ 1.13
DENND4AQ7Z401 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DENND4AQ7Z401 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
DENND4AQ7Z401 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DENND4AQ7Z401 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DENND4AQ7Z401 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.1■■□□□ 1.13
DENND4AQ7Z401 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DENND4AQ7Z401 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DENND4AQ7Z401 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 AL158047.1-201ENST00000445918 881 ntBASIC22.09■■□□□ 1.13
DENND4AQ7Z401 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DENND4AQ7Z401 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DENND4AQ7Z401 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DENND4AQ7Z401 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DENND4AQ7Z401 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
DENND4AQ7Z401 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
DENND4AQ7Z401 ESRRAP1-201ENST00000400596 1257 ntBASIC22.08■■□□□ 1.13
DENND4AQ7Z401 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.08■■□□□ 1.13
DENND4AQ7Z401 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
DENND4AQ7Z401 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.08■■□□□ 1.13
DENND4AQ7Z401 UNC93B4-201ENST00000505679 747 ntBASIC22.08■■□□□ 1.13
DENND4AQ7Z401 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.08■■□□□ 1.13
DENND4AQ7Z401 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DENND4AQ7Z401 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.08■■□□□ 1.13
DENND4AQ7Z401 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.08■■□□□ 1.13
DENND4AQ7Z401 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
DENND4AQ7Z401 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
DENND4AQ7Z401 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
DENND4AQ7Z401 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 AC008175.2-201ENST00000612840 297 ntBASIC22.07■■□□□ 1.12
DENND4AQ7Z401 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 AL596275.1-201ENST00000423464 877 ntBASIC22.07■■□□□ 1.12
DENND4AQ7Z401 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.07■■□□□ 1.12
DENND4AQ7Z401 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
DENND4AQ7Z401 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.06■■□□□ 1.12
DENND4AQ7Z401 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms