Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.44□□□□□ -1.73e-6■■■■□ 20
LARP4Q71RC2 MIR4647-201ENST00000583964 80 ntBASIC10.01□□□□□ -0.813e-20■■■■□ 20
LARP4Q71RC2 AC020915.6-202ENST00000637310 1463 ntAPPRIS ALT2 TSL 512.41□□□□□ -0.427e-6■■■■□ 20
LARP4Q71RC2 ZNF544-208ENST00000596825 3516 ntTSL 1 (best) BASIC12.29□□□□□ -0.447e-6■■■■□ 20
LARP4Q71RC2 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC12.03□□□□□ -0.487e-6■■■■□ 20
LARP4Q71RC2 AC020915.6-201ENST00000637233 3042 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.627e-6■■■■□ 20
LARP4Q71RC2 ZNF544-213ENST00000599227 3587 ntTSL 1 (best) BASIC11.11□□□□□ -0.637e-6■■■■□ 20
LARP4Q71RC2 ZNF544-215ENST00000599953 2274 ntTSL 5 BASIC10.79□□□□□ -0.687e-6■■■■□ 20
LARP4Q71RC2 ZNF544-203ENST00000594384 588 ntTSL 1 (best) BASIC10.53□□□□□ -0.727e-6■■■■□ 20
LARP4Q71RC2 ZNF544-204ENST00000595981 895 ntTSL 3 BASIC9.52□□□□□ -0.897e-6■■■■□ 20
LARP4Q71RC2 ZNF544-212ENST00000598880 570 ntTSL 58.73□□□□□ -1.017e-6■■■■□ 20
LARP4Q71RC2 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.117e-6■■■■□ 20
LARP4Q71RC2 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.99□□□□□ -1.137e-6■■■■□ 20
LARP4Q71RC2 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.79□□□□□ -1.167e-6■■■■□ 20
LARP4Q71RC2 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.167e-6■■■■□ 20
LARP4Q71RC2 ZNF544-207ENST00000596677 4109 ntTSL 57.06□□□□□ -1.287e-6■■■■□ 20
LARP4Q71RC2 ABHD12-205ENST00000465694 474 ntTSL 27.26□□□□□ -1.253e-7■■■■□ 19.9
LARP4Q71RC2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.511e-9■■■■□ 19.9
LARP4Q71RC2 RAC3-204ENST00000585014 798 ntTSL 217.37■□□□□ 0.371e-9■■■■□ 19.9
LARP4Q71RC2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.942e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.752e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.052e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-209ENST00000505426 688 ntTSL 212.91□□□□□ -0.342e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-221ENST00000514022 913 ntTSL 212.85□□□□□ -0.352e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-211ENST00000509047 670 ntTSL 312.55□□□□□ -0.42e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-215ENST00000511567 540 ntTSL 412.03□□□□□ -0.482e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.512e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-207ENST00000504493 641 ntTSL 1 (best)11.25□□□□□ -0.612e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-213ENST00000509585 562 ntTSL 511.04□□□□□ -0.642e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-210ENST00000505949 761 ntTSL 510.51□□□□□ -0.732e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC10.51□□□□□ -0.732e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-204ENST00000502248 670 ntTSL 1 (best)9.88□□□□□ -0.832e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-220ENST00000513999 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.862e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.082e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-205ENST00000502616 573 ntTSL 1 (best)8.23□□□□□ -1.092e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.192e-7■■■■□ 19.9
LARP4Q71RC2 ZNF331-222ENST00000514374 574 ntTSL 47.09□□□□□ -1.272e-7■■■■□ 19.9
LARP4Q71RC2 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.42□□□□□ -0.425e-10■■■■□ 19.9
LARP4Q71RC2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.245e-7■■■■□ 19.9
LARP4Q71RC2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.7■■□□□ 1.065e-7■■■■□ 19.9
LARP4Q71RC2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.065e-7■■■■□ 19.9
LARP4Q71RC2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.95■□□□□ 0.625e-7■■■■□ 19.9
LARP4Q71RC2 WRNIP1-201ENST00000380764 1557 ntTSL 2 BASIC11.57□□□□□ -0.565e-7■■■■□ 19.9
LARP4Q71RC2 MARCH3-203ENST00000504239 455 ntTSL 37.46□□□□□ -1.223e-6■■■■□ 19.9
LARP4Q71RC2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.58e-7■■■■□ 19.9
LARP4Q71RC2 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)16.84■□□□□ 0.298e-7■■■■□ 19.9
LARP4Q71RC2 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)15.5■□□□□ 0.078e-7■■■■□ 19.9
LARP4Q71RC2 COX7A2-207ENST00000481061 914 ntTSL 28.1□□□□□ -1.119e-8■■■■□ 19.9
LARP4Q71RC2 TXN-203ENST00000487892 540 ntTSL 27.15□□□□□ -1.265e-10■■■■□ 19.9
LARP4Q71RC2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.51■□□□□ 0.552e-9■■■■□ 19.8
LARP4Q71RC2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.222e-9■■■■□ 19.8
LARP4Q71RC2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.355e-10■■■■□ 19.8
LARP4Q71RC2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.335e-10■■■■□ 19.8
LARP4Q71RC2 CFL1-210ENST00000530945 1509 ntTSL 216.3■□□□□ 0.25e-10■■■■□ 19.8
LARP4Q71RC2 CFL1-207ENST00000527752 766 ntTSL 510.55□□□□□ -0.725e-10■■■■□ 19.8
LARP4Q71RC2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.71■□□□□ 0.597e-10■■■■□ 19.8
LARP4Q71RC2 ERF-203ENST00000593944 555 ntTSL 416.99■□□□□ 0.316e-7■■■■□ 19.8
LARP4Q71RC2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.54■□□□□ 0.247e-10■■■■□ 19.8
LARP4Q71RC2 MRPS9-203ENST00000472220 982 ntTSL 215.36■□□□□ 0.057e-10■■■■□ 19.8
LARP4Q71RC2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.07■□□□□ 07e-10■■■■□ 19.8
LARP4Q71RC2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.67□□□□□ -0.067e-10■■■■□ 19.8
LARP4Q71RC2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.137e-10■■■■□ 19.8
LARP4Q71RC2 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.327e-10■■■■□ 19.8
LARP4Q71RC2 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.357e-10■■■■□ 19.8
LARP4Q71RC2 CDK4-205ENST00000547853 228 ntTSL 39.59□□□□□ -0.877e-10■■■■□ 19.8
LARP4Q71RC2 TSFM-209ENST00000548851 794 ntTSL 3 BASIC9.16□□□□□ -0.947e-10■■■■□ 19.8
LARP4Q71RC2 CDK4-211ENST00000552254 769 ntTSL 28.47□□□□□ -1.057e-10■■■■□ 19.8
LARP4Q71RC2 ERF-205ENST00000595941 227 ntTSL 47.96□□□□□ -1.146e-7■■■■□ 19.8
LARP4Q71RC2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.622e-7■■■■□ 19.8
LARP4Q71RC2 FBL-204ENST00000594443 805 ntTSL 311.31□□□□□ -0.62e-7■■■■□ 19.8
LARP4Q71RC2 HPCAL1-203ENST00000419810 4781 ntTSL 1 (best)12.9□□□□□ -0.342e-6■■■■□ 19.8
LARP4Q71RC2 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.222e-9■■■■□ 19.8
LARP4Q71RC2 ANP32A-207ENST00000486054 2015 ntTSL 217.61■□□□□ 0.416e-12■■■■□ 19.7
LARP4Q71RC2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.026e-12■■■■□ 19.7
LARP4Q71RC2 ANP32A-202ENST00000409628 2001 ntTSL 514.65□□□□□ -0.066e-12■■■■□ 19.7
LARP4Q71RC2 ANP32A-201ENST00000267918 1084 ntTSL 313.74□□□□□ -0.216e-12■■■■□ 19.7
LARP4Q71RC2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.838e-12■■■■□ 19.7
LARP4Q71RC2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.8■□□□□ 0.768e-12■■■■□ 19.7
LARP4Q71RC2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.3■□□□□ 0.688e-12■■■■□ 19.7
LARP4Q71RC2 MRPL37-203ENST00000398219 868 ntTSL 312.47□□□□□ -0.418e-12■■■■□ 19.7
LARP4Q71RC2 HPCAL1-205ENST00000423674 586 ntTSL 420.85■□□□□ 0.932e-6■■■■□ 19.7
LARP4Q71RC2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.596e-8■■■■□ 19.7
LARP4Q71RC2 SSU72-204ENST00000378726 2238 ntTSL 219.03■□□□□ 0.646e-8■■■■□ 19.7
LARP4Q71RC2 DRAP1-209ENST00000534333 453 ntTSL 218.16■□□□□ 0.51e-6■■■■□ 19.7
LARP4Q71RC2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.88■□□□□ 0.131e-6■■■■□ 19.7
LARP4Q71RC2 POLR2A-209ENST00000617998 6751 ntTSL 1 (best)10.52□□□□□ -0.732e-7■■■■□ 19.7
LARP4Q71RC2 TMEM9-210ENST00000495205 971 ntTSL 512.28□□□□□ -0.442e-6■■■■□ 19.7
LARP4Q71RC2 ATP6V0D1-207ENST00000563305 1656 ntTSL 515.45■□□□□ 0.062e-8■■■■□ 19.7
LARP4Q71RC2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.042e-8■■■■□ 19.7
LARP4Q71RC2 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC13.08□□□□□ -0.322e-8■■■■□ 19.7
LARP4Q71RC2 ATP6V0D1-217ENST00000568620 3390 ntTSL 211.66□□□□□ -0.542e-8■■■■□ 19.7
LARP4Q71RC2 SAPCD1-210ENST00000433778 607 ntTSL 314.95□□□□□ -0.029e-10■■■■□ 19.7
LARP4Q71RC2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.613e-6■■■■□ 19.7
LARP4Q71RC2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.713e-6■■■■□ 19.7
LARP4Q71RC2 FANCI-203ENST00000447611 3690 ntTSL 23.19□□□□□ -1.93e-6■■■■□ 19.7
LARP4Q71RC2 TEX264-213ENST00000489026 800 ntTSL 214.31□□□□□ -0.125e-9■■■■□ 19.7
LARP4Q71RC2 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.383e-6■■■■□ 19.7
LARP4Q71RC2 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.271e-7■■■■□ 19.7
LARP4Q71RC2 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.391e-7■■■■□ 19.7
LARP4Q71RC2 FIS1-209ENST00000482199 731 ntTSL 315.23■□□□□ 0.031e-6■■■■□ 19.6
Retrieved 100 of 15,922 protein–RNA pairs in 131.1 ms