Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
RAPH1Q70E73 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPH1Q70E73 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPH1Q70E73 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
RAPH1Q70E73 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPH1Q70E73 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.29■■□□□ 1
RAPH1Q70E73 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPH1Q70E73 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPH1Q70E73 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPH1Q70E73 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPH1Q70E73 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPH1Q70E73 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAPH1Q70E73 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAPH1Q70E73 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RAPH1Q70E73 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.29■■□□□ 1
RAPH1Q70E73 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.29■■□□□ 1
RAPH1Q70E73 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RAPH1Q70E73 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPH1Q70E73 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAPH1Q70E73 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPH1Q70E73 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RAPH1Q70E73 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.28■■□□□ 1
RAPH1Q70E73 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPH1Q70E73 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAPH1Q70E73 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RAPH1Q70E73 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.28■■□□□ 1
RAPH1Q70E73 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RAPH1Q70E73 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPH1Q70E73 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPH1Q70E73 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAPH1Q70E73 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAPH1Q70E73 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.28■■□□□ 1
RAPH1Q70E73 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.28■■□□□ 1
RAPH1Q70E73 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPH1Q70E73 OXCT2P1-201ENST00000447263 1535 ntBASIC21.28■■□□□ 1
RAPH1Q70E73 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.28■■□□□ 1
RAPH1Q70E73 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RAPH1Q70E73 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPH1Q70E73 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RAPH1Q70E73 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAPH1Q70E73 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RAPH1Q70E73 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RAPH1Q70E73 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAPH1Q70E73 SERBP1P1-201ENST00000396021 1160 ntBASIC21.27■■□□□ 1
RAPH1Q70E73 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAPH1Q70E73 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAPH1Q70E73 DUX4L19-201ENST00000557448 1267 ntBASIC21.27■■□□□ 1
RAPH1Q70E73 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAPH1Q70E73 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RAPH1Q70E73 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAPH1Q70E73 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAPH1Q70E73 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAPH1Q70E73 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.27■□□□□ 0.99
RAPH1Q70E73 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RAPH1Q70E73 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.26■□□□□ 0.99
RAPH1Q70E73 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAPH1Q70E73 AF106564.1-201ENST00000607058 2553 ntBASIC21.26■□□□□ 0.99
RAPH1Q70E73 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPH1Q70E73 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.26■□□□□ 0.99
RAPH1Q70E73 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPH1Q70E73 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.26■□□□□ 0.99
RAPH1Q70E73 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RAPH1Q70E73 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.26■□□□□ 0.99
RAPH1Q70E73 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.26■□□□□ 0.99
RAPH1Q70E73 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAPH1Q70E73 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPH1Q70E73 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPH1Q70E73 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAPH1Q70E73 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RAPH1Q70E73 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.26■□□□□ 0.99
RAPH1Q70E73 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.25■□□□□ 0.99
RAPH1Q70E73 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.25■□□□□ 0.99
RAPH1Q70E73 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 AL138724.1-201ENST00000606771 1088 ntBASIC21.25■□□□□ 0.99
RAPH1Q70E73 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.25■□□□□ 0.99
RAPH1Q70E73 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.25■□□□□ 0.99
RAPH1Q70E73 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPH1Q70E73 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RAPH1Q70E73 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPH1Q70E73 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.24■□□□□ 0.99
RAPH1Q70E73 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPH1Q70E73 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.24■□□□□ 0.99
RAPH1Q70E73 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
RAPH1Q70E73 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RAPH1Q70E73 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms