Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.4■□□□□ 0.54
C11orf88Q6PI97 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.4■□□□□ 0.54
C11orf88Q6PI97 AC131281.2-201ENST00000520478 145 ntBASIC18.4■□□□□ 0.54
C11orf88Q6PI97 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf88Q6PI97 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf88Q6PI97 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
C11orf88Q6PI97 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.4■□□□□ 0.54
C11orf88Q6PI97 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf88Q6PI97 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
C11orf88Q6PI97 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.39■□□□□ 0.54
C11orf88Q6PI97 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
C11orf88Q6PI97 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
C11orf88Q6PI97 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.39■□□□□ 0.53
C11orf88Q6PI97 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C11orf88Q6PI97 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.39■□□□□ 0.53
C11orf88Q6PI97 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.39■□□□□ 0.53
C11orf88Q6PI97 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C11orf88Q6PI97 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
C11orf88Q6PI97 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C11orf88Q6PI97 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.39■□□□□ 0.53
C11orf88Q6PI97 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
C11orf88Q6PI97 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C11orf88Q6PI97 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 AL139246.5-201ENST00000606645 996 ntBASIC18.38■□□□□ 0.53
C11orf88Q6PI97 MIR6722-201ENST00000617286 78 ntBASIC18.38■□□□□ 0.53
C11orf88Q6PI97 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.38■□□□□ 0.53
C11orf88Q6PI97 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
C11orf88Q6PI97 AL157384.1-201ENST00000445995 2473 ntBASIC18.38■□□□□ 0.53
C11orf88Q6PI97 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 AL353803.4-201ENST00000565882 1934 ntBASIC18.37■□□□□ 0.53
C11orf88Q6PI97 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 AL136116.3-201ENST00000402907 1138 ntBASIC18.37■□□□□ 0.53
C11orf88Q6PI97 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 LINC01521-201ENST00000504184 1943 ntBASIC18.37■□□□□ 0.53
C11orf88Q6PI97 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
C11orf88Q6PI97 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf88Q6PI97 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 SNX5-217ENST00000606557 1087 ntBASIC18.35■□□□□ 0.53
C11orf88Q6PI97 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf88Q6PI97 AC087742.1-201ENST00000575880 1738 ntBASIC18.35■□□□□ 0.53
C11orf88Q6PI97 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms