Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.73■■□□□ 1.87
PRPF40BQ6NWY9 MIR4758-201ENST00000577688 71 ntBASIC26.73■■□□□ 1.87
PRPF40BQ6NWY9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PRPF40BQ6NWY9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.73■■□□□ 1.87
PRPF40BQ6NWY9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
PRPF40BQ6NWY9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
PRPF40BQ6NWY9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PRPF40BQ6NWY9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PRPF40BQ6NWY9 PRORSD1P-201ENST00000295112 541 ntBASIC26.72■■□□□ 1.87
PRPF40BQ6NWY9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
PRPF40BQ6NWY9 KRT18P29-201ENST00000397031 1267 ntBASIC26.72■■□□□ 1.87
PRPF40BQ6NWY9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.72■■□□□ 1.87
PRPF40BQ6NWY9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.72■■□□□ 1.87
PRPF40BQ6NWY9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PRPF40BQ6NWY9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.72■■□□□ 1.87
PRPF40BQ6NWY9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.72■■□□□ 1.87
PRPF40BQ6NWY9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 AC138907.5-202ENST00000569484 235 ntBASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
PRPF40BQ6NWY9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.7■■□□□ 1.87
PRPF40BQ6NWY9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
PRPF40BQ6NWY9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
PRPF40BQ6NWY9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PRPF40BQ6NWY9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
PRPF40BQ6NWY9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PRPF40BQ6NWY9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.7■■□□□ 1.86
PRPF40BQ6NWY9 KRT18P20-201ENST00000548986 1279 ntBASIC26.7■■□□□ 1.86
PRPF40BQ6NWY9 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.7■■□□□ 1.86
PRPF40BQ6NWY9 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.7■■□□□ 1.86
PRPF40BQ6NWY9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.69■■□□□ 1.86
PRPF40BQ6NWY9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.69■■□□□ 1.86
PRPF40BQ6NWY9 MIPEPP3-201ENST00000412105 444 ntBASIC26.69■■□□□ 1.86
PRPF40BQ6NWY9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
PRPF40BQ6NWY9 AC013268.1-206ENST00000638368 961 ntBASIC26.69■■□□□ 1.86
PRPF40BQ6NWY9 AC112229.1-201ENST00000639295 961 ntBASIC26.69■■□□□ 1.86
PRPF40BQ6NWY9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.69■■□□□ 1.86
PRPF40BQ6NWY9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.69■■□□□ 1.86
PRPF40BQ6NWY9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PRPF40BQ6NWY9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
PRPF40BQ6NWY9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PRPF40BQ6NWY9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PRPF40BQ6NWY9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PRPF40BQ6NWY9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.68■■□□□ 1.86
PRPF40BQ6NWY9 CYP2T1P-201ENST00000432607 1285 ntBASIC26.68■■□□□ 1.86
PRPF40BQ6NWY9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.68■■□□□ 1.86
PRPF40BQ6NWY9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PRPF40BQ6NWY9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PRPF40BQ6NWY9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.67■■□□□ 1.86
PRPF40BQ6NWY9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.67■■□□□ 1.86
PRPF40BQ6NWY9 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.67■■□□□ 1.86
PRPF40BQ6NWY9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.67■■□□□ 1.86
PRPF40BQ6NWY9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.67■■□□□ 1.86
PRPF40BQ6NWY9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PRPF40BQ6NWY9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PRPF40BQ6NWY9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
PRPF40BQ6NWY9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PRPF40BQ6NWY9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PRPF40BQ6NWY9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PRPF40BQ6NWY9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.66■■□□□ 1.86
PRPF40BQ6NWY9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PRPF40BQ6NWY9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PRPF40BQ6NWY9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.66■■□□□ 1.86
PRPF40BQ6NWY9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
PRPF40BQ6NWY9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
PRPF40BQ6NWY9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PRPF40BQ6NWY9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PRPF40BQ6NWY9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 AC068338.2-201ENST00000563278 1430 ntBASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 MKRN4P-201ENST00000444706 1521 ntBASIC26.65■■□□□ 1.86
PRPF40BQ6NWY9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PRPF40BQ6NWY9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
PRPF40BQ6NWY9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.64■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms