Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC243732.1-201ENST00000612648 864 ntBASIC27.14■■□□□ 1.94
RC3H1Q5TC82 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27.14■■□□□ 1.94
RC3H1Q5TC82 KRT16P2-201ENST00000414673 1423 ntBASIC27.14■■□□□ 1.93
RC3H1Q5TC82 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.14■■□□□ 1.93
RC3H1Q5TC82 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC27.13■■□□□ 1.93
RC3H1Q5TC82 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC27.13■■□□□ 1.93
RC3H1Q5TC82 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.13■■□□□ 1.93
RC3H1Q5TC82 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H1Q5TC82 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H1Q5TC82 AC128676.1-201ENST00000454392 318 ntBASIC27.13■■□□□ 1.93
RC3H1Q5TC82 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC27.13■■□□□ 1.93
RC3H1Q5TC82 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H1Q5TC82 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC27.13■■□□□ 1.93
RC3H1Q5TC82 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC27.13■■□□□ 1.93
RC3H1Q5TC82 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC27.13■■□□□ 1.93
RC3H1Q5TC82 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H1Q5TC82 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RC3H1Q5TC82 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RC3H1Q5TC82 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC27.12■■□□□ 1.93
RC3H1Q5TC82 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RC3H1Q5TC82 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC27.12■■□□□ 1.93
RC3H1Q5TC82 AC006058.3-201ENST00000606217 1069 ntBASIC27.12■■□□□ 1.93
RC3H1Q5TC82 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.12■■□□□ 1.93
RC3H1Q5TC82 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
RC3H1Q5TC82 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RC3H1Q5TC82 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RC3H1Q5TC82 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC27.12■■□□□ 1.93
RC3H1Q5TC82 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RC3H1Q5TC82 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RC3H1Q5TC82 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
RC3H1Q5TC82 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC27.11■■□□□ 1.93
RC3H1Q5TC82 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
RC3H1Q5TC82 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
RC3H1Q5TC82 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
RC3H1Q5TC82 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
RC3H1Q5TC82 AC142381.4-202ENST00000563973 229 ntBASIC27.11■■□□□ 1.93
RC3H1Q5TC82 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27.11■■□□□ 1.93
RC3H1Q5TC82 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RC3H1Q5TC82 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RC3H1Q5TC82 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RC3H1Q5TC82 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC27.1■■□□□ 1.93
RC3H1Q5TC82 INO80E-214ENST00000620599 515 ntTSL 2 BASIC27.1■■□□□ 1.93
RC3H1Q5TC82 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
RC3H1Q5TC82 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RC3H1Q5TC82 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.1■■□□□ 1.93
RC3H1Q5TC82 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RC3H1Q5TC82 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RC3H1Q5TC82 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC27.09■■□□□ 1.93
RC3H1Q5TC82 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
RC3H1Q5TC82 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RC3H1Q5TC82 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RC3H1Q5TC82 MMD2-204ENST00000612910 778 ntTSL 5 BASIC27.09■■□□□ 1.93
RC3H1Q5TC82 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.09■■□□□ 1.93
RC3H1Q5TC82 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
RC3H1Q5TC82 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RC3H1Q5TC82 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RC3H1Q5TC82 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RC3H1Q5TC82 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RC3H1Q5TC82 BAALC-201ENST00000297574 801 ntTSL 3 BASIC27.08■■□□□ 1.93
RC3H1Q5TC82 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
RC3H1Q5TC82 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC27.08■■□□□ 1.93
RC3H1Q5TC82 AL596275.1-201ENST00000423464 877 ntBASIC27.08■■□□□ 1.93
RC3H1Q5TC82 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
RC3H1Q5TC82 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC27.08■■□□□ 1.93
RC3H1Q5TC82 PBX1-209ENST00000485769 834 ntTSL 2 BASIC27.08■■□□□ 1.93
RC3H1Q5TC82 UNC93B5-201ENST00000530315 699 ntBASIC27.08■■□□□ 1.93
RC3H1Q5TC82 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RC3H1Q5TC82 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RC3H1Q5TC82 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RC3H1Q5TC82 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RC3H1Q5TC82 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RC3H1Q5TC82 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC27.07■■□□□ 1.92
RC3H1Q5TC82 AL158047.1-201ENST00000445918 881 ntBASIC27.07■■□□□ 1.92
RC3H1Q5TC82 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC27.07■■□□□ 1.92
RC3H1Q5TC82 AC026366.1-201ENST00000488803 879 ntBASIC27.07■■□□□ 1.92
RC3H1Q5TC82 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC27.07■■□□□ 1.92
RC3H1Q5TC82 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.07■■□□□ 1.92
RC3H1Q5TC82 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RC3H1Q5TC82 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RC3H1Q5TC82 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
RC3H1Q5TC82 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC27.06■■□□□ 1.92
RC3H1Q5TC82 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC27.06■■□□□ 1.92
RC3H1Q5TC82 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC27.06■■□□□ 1.92
RC3H1Q5TC82 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RC3H1Q5TC82 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC27.06■■□□□ 1.92
RC3H1Q5TC82 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RC3H1Q5TC82 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RC3H1Q5TC82 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC27.05■■□□□ 1.92
RC3H1Q5TC82 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
RC3H1Q5TC82 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.05■■□□□ 1.92
RC3H1Q5TC82 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC27.05■■□□□ 1.92
RC3H1Q5TC82 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
RC3H1Q5TC82 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RC3H1Q5TC82 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC27.05■■□□□ 1.92
RC3H1Q5TC82 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC27.05■■□□□ 1.92
RC3H1Q5TC82 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC27.05■■□□□ 1.92
RC3H1Q5TC82 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
RC3H1Q5TC82 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
RC3H1Q5TC82 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RC3H1Q5TC82 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms