Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 AL049796.1-201ENST00000565336 1766 ntBASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 MIR6722-201ENST00000617286 78 ntBASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.61■□□□□ 0.41
ANKRD55Q3KP44 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 AL451085.2-201ENST00000605085 799 ntBASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ANKRD55Q3KP44 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 BX664725.1-201ENST00000438252 379 ntBASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ANKRD55Q3KP44 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
ANKRD55Q3KP44 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ANKRD55Q3KP44 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
ANKRD55Q3KP44 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.58■□□□□ 0.41
ANKRD55Q3KP44 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 AC009299.2-201ENST00000482477 511 ntBASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 AC079089.2-201ENST00000531211 1277 ntBASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 KRT125P-201ENST00000546827 989 ntBASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 Z92544.1-202ENST00000571933 1220 ntBASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 AL035685.1-201ENST00000636663 812 ntBASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 AC009102.2-201ENST00000606772 1639 ntBASIC17.58■□□□□ 0.4
ANKRD55Q3KP44 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ANKRD55Q3KP44 GABARAPL3-202ENST00000624044 1851 ntBASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms