Protein–RNA interactions for Protein: Q2QD12

RPEL1, Ribulose-phosphate 3-epimerase-like protein 1, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPEL1Q2QD12 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 AP001330.3-201ENST00000520123 633 ntBASIC16.9■□□□□ 0.3
RPEL1Q2QD12 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 AF213884.3-201ENST00000563833 479 ntBASIC16.9■□□□□ 0.3
RPEL1Q2QD12 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.9■□□□□ 0.3
RPEL1Q2QD12 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
RPEL1Q2QD12 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RPEL1Q2QD12 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
RPEL1Q2QD12 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 AC099791.1-201ENST00000416440 715 ntBASIC16.89■□□□□ 0.29
RPEL1Q2QD12 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 AC091305.1-201ENST00000479476 895 ntBASIC16.89■□□□□ 0.29
RPEL1Q2QD12 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 AC087239.1-201ENST00000622671 572 ntBASIC16.89■□□□□ 0.29
RPEL1Q2QD12 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RPEL1Q2QD12 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 AC010525.1-201ENST00000585559 441 ntBASIC16.88■□□□□ 0.29
RPEL1Q2QD12 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 AC068587.7-201ENST00000641602 218 ntBASIC16.88■□□□□ 0.29
RPEL1Q2QD12 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.88■□□□□ 0.29
RPEL1Q2QD12 RASA4CP-201ENST00000424092 1398 ntBASIC16.88■□□□□ 0.29
RPEL1Q2QD12 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 MIR939-201ENST00000401314 82 ntBASIC16.87■□□□□ 0.29
RPEL1Q2QD12 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.87■□□□□ 0.29
RPEL1Q2QD12 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPEL1Q2QD12 LINC01960-201ENST00000563759 1884 ntBASIC16.86■□□□□ 0.29
RPEL1Q2QD12 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms