Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 AC096631.2-201ENST00000436136 790 ntBASIC14.04□□□□□ -0.16
SYCNQ0VAF6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 PBX2P1-201ENST00000493219 1291 ntBASIC14.04□□□□□ -0.16
SYCNQ0VAF6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYCNQ0VAF6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYCNQ0VAF6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SYCNQ0VAF6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.02□□□□□ -0.16
SYCNQ0VAF6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SYCNQ0VAF6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SYCNQ0VAF6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
SYCNQ0VAF6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.02□□□□□ -0.16
SYCNQ0VAF6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYCNQ0VAF6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.02□□□□□ -0.17
SYCNQ0VAF6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYCNQ0VAF6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.02□□□□□ -0.17
SYCNQ0VAF6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.02□□□□□ -0.17
SYCNQ0VAF6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.02□□□□□ -0.17
SYCNQ0VAF6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.02□□□□□ -0.17
SYCNQ0VAF6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.02□□□□□ -0.17
SYCNQ0VAF6 AC008764.7-201ENST00000593779 1081 ntBASIC14.02□□□□□ -0.17
SYCNQ0VAF6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SYCNQ0VAF6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYCNQ0VAF6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYCNQ0VAF6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.01□□□□□ -0.17
SYCNQ0VAF6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14□□□□□ -0.17
SYCNQ0VAF6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
SYCNQ0VAF6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14□□□□□ -0.17
SYCNQ0VAF6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SYCNQ0VAF6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14□□□□□ -0.17
SYCNQ0VAF6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14□□□□□ -0.17
SYCNQ0VAF6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14□□□□□ -0.17
SYCNQ0VAF6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SYCNQ0VAF6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14□□□□□ -0.17
SYCNQ0VAF6 IGHV3-19-201ENST00000521488 291 ntBASIC14□□□□□ -0.17
SYCNQ0VAF6 AC027682.1-201ENST00000562846 899 ntBASIC14□□□□□ -0.17
SYCNQ0VAF6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14□□□□□ -0.17
SYCNQ0VAF6 GRAMD4P4-201ENST00000613563 1115 ntBASIC14□□□□□ -0.17
SYCNQ0VAF6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SYCNQ0VAF6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14□□□□□ -0.17
SYCNQ0VAF6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SYCNQ0VAF6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms