Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YSF3YNL138W-A 258 nt4.31□□□□□ -1.72
SSL2Q00578 COS1YNL336W 1146 nt4.31□□□□□ -1.72
SSL2Q00578 MCA1YOR197W 1299 nt4.31□□□□□ -1.72
SSL2Q00578 YOR263CYOR263C 408 nt4.31□□□□□ -1.72
SSL2Q00578 HAP4YKL109W 1665 nt4.31□□□□□ -1.72
SSL2Q00578 SMP3YOR149C 1551 nt4.31□□□□□ -1.72
SSL2Q00578 NTH1YDR001C 2256 nt4.3□□□□□ -1.72
SSL2Q00578 AGE1YDR524C 1449 nt4.3□□□□□ -1.72
SSL2Q00578 SNF2YOR290C 5112 nt4.3□□□□□ -1.72
SSL2Q00578 RNA14YMR061W 2034 nt4.3□□□□□ -1.72
SSL2Q00578 snR84snR84 550 nt4.3□□□□□ -1.72
SSL2Q00578 UBC8YEL012W 657 nt4.3□□□□□ -1.72
SSL2Q00578 YER076CYER076C 909 nt4.3□□□□□ -1.72
SSL2Q00578 TOS8YGL096W 831 nt4.3□□□□□ -1.72
SSL2Q00578 YIL030W-AYIL030W-A 339 nt4.3□□□□□ -1.72
SSL2Q00578 OAR1YKL055C 837 nt4.3□□□□□ -1.72
SSL2Q00578 GIM5YML094W 492 nt4.3□□□□□ -1.72
SSL2Q00578 MOH1YBL049W 417 nt4.3□□□□□ -1.72
SSL2Q00578 YNL057WYNL057W 333 nt4.3□□□□□ -1.72
SSL2Q00578 GIM3YNL153C 390 nt4.3□□□□□ -1.72
SSL2Q00578 MCK1YNL307C 1128 nt4.3□□□□□ -1.72
SSL2Q00578 MFB1YDR219C 1398 nt4.29□□□□□ -1.72
SSL2Q00578 BCK2YER167W 2556 nt4.29□□□□□ -1.72
SSL2Q00578 VPS27YNR006W 1869 nt4.29□□□□□ -1.72
SSL2Q00578 IMH1YLR309C 2736 nt4.29□□□□□ -1.72
SSL2Q00578 PPH3YDR075W 927 nt4.29□□□□□ -1.72
SSL2Q00578 YEL030C-AYEL030C-A 315 nt4.29□□□□□ -1.72
SSL2Q00578 SDH3YKL141W 597 nt4.29□□□□□ -1.72
SSL2Q00578 MCM1YMR043W 861 nt4.29□□□□□ -1.72
SSL2Q00578 RFC5YBR087W 1065 nt4.29□□□□□ -1.72
SSL2Q00578 DSE1YER124C 1722 nt4.29□□□□□ -1.72
SSL2Q00578 HCM1YCR065W 1695 nt4.29□□□□□ -1.72
SSL2Q00578 PPQ1YPL179W 1650 nt4.29□□□□□ -1.72
SSL2Q00578 TRK1YJL129C 3708 nt4.28□□□□□ -1.72
SSL2Q00578 MEF1YLR069C 2286 nt4.28□□□□□ -1.72
SSL2Q00578 FMP25YLR077W 1752 nt4.28□□□□□ -1.72
SSL2Q00578 CDC37YDR168W 1521 nt4.28□□□□□ -1.72
SSL2Q00578 RIM1YCR028C-A 408 nt4.28□□□□□ -1.72
SSL2Q00578 RPP1AYDL081C 321 nt4.28□□□□□ -1.72
SSL2Q00578 AHP1YLR109W 531 nt4.28□□□□□ -1.72
SSL2Q00578 YLR257WYLR257W 966 nt4.28□□□□□ -1.72
SSL2Q00578 YMR010WYMR010W 1218 nt4.28□□□□□ -1.72
SSL2Q00578 GCD1YOR260W 1737 nt4.28□□□□□ -1.72
SSL2Q00578 PRS5YOL061W 1491 nt4.28□□□□□ -1.72
SSL2Q00578 CLG1YGL215W 1359 nt4.27□□□□□ -1.73
SSL2Q00578 SPO23YBR250W 1572 nt4.27□□□□□ -1.73
SSL2Q00578 NAT1YDL040C 2565 nt4.27□□□□□ -1.73
SSL2Q00578 YPR003CYPR003C 2265 nt4.27□□□□□ -1.73
SSL2Q00578 RXT3YDL076C 885 nt4.27□□□□□ -1.73
SSL2Q00578 NOP6YDL213C 678 nt4.27□□□□□ -1.73
SSL2Q00578 YDR157WYDR157W 402 nt4.27□□□□□ -1.73
SSL2Q00578 TMA20YER007C-A 546 nt4.27□□□□□ -1.73
SSL2Q00578 YLR154W-FYLR154W-F 141 nt4.27□□□□□ -1.73
SSL2Q00578 HTA2YBL003C 399 nt4.27□□□□□ -1.73
SSL2Q00578 YNL122CYNL122C 348 nt4.27□□□□□ -1.73
SSL2Q00578 YNL324WYNL324W 396 nt4.27□□□□□ -1.73
SSL2Q00578 LYS2YBR115C 4179 nt4.27□□□□□ -1.73
SSL2Q00578 RGL1YPL066W 1440 nt4.27□□□□□ -1.73
SSL2Q00578 ALO1YML086C 1581 nt4.27□□□□□ -1.73
SSL2Q00578 RTS1YOR014W 2274 nt4.26□□□□□ -1.73
SSL2Q00578 MCP2YLR253W 1710 nt4.26□□□□□ -1.73
SSL2Q00578 MIX14YDR031W 366 nt4.26□□□□□ -1.73
SSL2Q00578 YDR271CYDR271C 372 nt4.26□□□□□ -1.73
SSL2Q00578 ATP5YDR298C 639 nt4.26□□□□□ -1.73
SSL2Q00578 SPO73YER046W 432 nt4.26□□□□□ -1.73
SSL2Q00578 SPI1YER150W 447 nt4.26□□□□□ -1.73
SSL2Q00578 YGR018CYGR018C 330 nt4.26□□□□□ -1.73
SSL2Q00578 SOP4YJL192C 705 nt4.26□□□□□ -1.73
SSL2Q00578 YAL034C-BYAL034C-B 354 nt4.26□□□□□ -1.73
SSL2Q00578 VMA5YKL080W 1179 nt4.26□□□□□ -1.73
SSL2Q00578 FYV7YLR068W 456 nt4.26□□□□□ -1.73
SSL2Q00578 YOR022CYOR022C 2148 nt4.26□□□□□ -1.73
SSL2Q00578 YOR387CYOR387C 621 nt4.26□□□□□ -1.73
SSL2Q00578 POL30YBR088C 777 nt4.26□□□□□ -1.73
SSL2Q00578 ORC4YPR162C 1590 nt4.26□□□□□ -1.73
SSL2Q00578 TRS120YDR407C 3870 nt4.25□□□□□ -1.73
SSL2Q00578 DSL1YNL258C 2265 nt4.25□□□□□ -1.73
SSL2Q00578 TAF7YMR227C 1773 nt4.25□□□□□ -1.73
SSL2Q00578 USA1YML029W 2517 nt4.25□□□□□ -1.73
SSL2Q00578 HOM2YDR158W 1098 nt4.25□□□□□ -1.73
SSL2Q00578 YHL046W-AYHL046W-A 327 nt4.25□□□□□ -1.73
SSL2Q00578 RRF1YHR038W 693 nt4.25□□□□□ -1.73
SSL2Q00578 REC104YHR157W 549 nt4.25□□□□□ -1.73
SSL2Q00578 tX(XXX)DtX(XXX)D 100 nt4.25□□□□□ -1.73
SSL2Q00578 HCA4YJL033W 2313 nt4.25□□□□□ -1.73
SSL2Q00578 YJR087WYJR087W 351 nt4.25□□□□□ -1.73
SSL2Q00578 YKR011CYKR011C 1062 nt4.25□□□□□ -1.73
SSL2Q00578 PAM18YLR008C 507 nt4.25□□□□□ -1.73
SSL2Q00578 ARP9YMR033W 1404 nt4.25□□□□□ -1.73
SSL2Q00578 TPM1YNL079C 600 nt4.25□□□□□ -1.73
SSL2Q00578 NIP7YPL211W 546 nt4.25□□□□□ -1.73
SSL2Q00578 UBX3YDL091C 1368 nt4.25□□□□□ -1.73
SSL2Q00578 PUB1YNL016W 1362 nt4.25□□□□□ -1.73
SSL2Q00578 MNR2YKL064W 2910 nt4.25□□□□□ -1.73
SSL2Q00578 BSC1YDL037C 987 nt4.24□□□□□ -1.73
SSL2Q00578 IZH1YDR492W 951 nt4.24□□□□□ -1.73
SSL2Q00578 GTF1YGR102C 552 nt4.24□□□□□ -1.73
SSL2Q00578 VMA21YGR105W 234 nt4.24□□□□□ -1.73
SSL2Q00578 ATG27YJL178C 816 nt4.24□□□□□ -1.73
SSL2Q00578 YKL115CYKL115C 393 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms