Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RBM3P98179 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RBM3P98179 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.41□□□□□ -0.26
RBM3P98179 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RBM3P98179 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RBM3P98179 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RBM3P98179 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC13.4□□□□□ -0.26
RBM3P98179 REST-210ENST00000638187 1334 ntTSL 5 BASIC13.4□□□□□ -0.26
RBM3P98179 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RBM3P98179 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
RBM3P98179 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
RBM3P98179 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RBM3P98179 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
RBM3P98179 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RBM3P98179 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RBM3P98179 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC13.4□□□□□ -0.26
RBM3P98179 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC13.4□□□□□ -0.26
RBM3P98179 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC13.4□□□□□ -0.26
RBM3P98179 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RBM3P98179 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RBM3P98179 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC13.4□□□□□ -0.26
RBM3P98179 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC13.4□□□□□ -0.26
RBM3P98179 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RBM3P98179 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
RBM3P98179 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.4□□□□□ -0.26
RBM3P98179 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RBM3P98179 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
RBM3P98179 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.4□□□□□ -0.27
RBM3P98179 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.39□□□□□ -0.27
RBM3P98179 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RBM3P98179 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 RP9P-202ENST00000450133 1212 ntBASIC13.39□□□□□ -0.27
RBM3P98179 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC13.39□□□□□ -0.27
RBM3P98179 AL157400.5-201ENST00000507624 621 ntBASIC13.39□□□□□ -0.27
RBM3P98179 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC13.39□□□□□ -0.27
RBM3P98179 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RBM3P98179 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.39□□□□□ -0.27
RBM3P98179 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
RBM3P98179 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.39□□□□□ -0.27
RBM3P98179 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC13.39□□□□□ -0.27
RBM3P98179 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.39□□□□□ -0.27
RBM3P98179 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RBM3P98179 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RBM3P98179 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RBM3P98179 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RBM3P98179 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RBM3P98179 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RBM3P98179 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC13.38□□□□□ -0.27
RBM3P98179 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RBM3P98179 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.38□□□□□ -0.27
RBM3P98179 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RBM3P98179 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RBM3P98179 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC13.38□□□□□ -0.27
RBM3P98179 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RBM3P98179 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RBM3P98179 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC13.38□□□□□ -0.27
RBM3P98179 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RBM3P98179 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RBM3P98179 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.38□□□□□ -0.27
RBM3P98179 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RBM3P98179 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RBM3P98179 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RBM3P98179 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RBM3P98179 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.38□□□□□ -0.27
RBM3P98179 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RBM3P98179 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC13.37□□□□□ -0.27
RBM3P98179 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RBM3P98179 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RBM3P98179 PKD1P1-201ENST00000458669 6805 ntBASIC13.37□□□□□ -0.27
RBM3P98179 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC13.37□□□□□ -0.27
RBM3P98179 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RBM3P98179 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC13.37□□□□□ -0.27
RBM3P98179 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RBM3P98179 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RBM3P98179 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RBM3P98179 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RBM3P98179 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RBM3P98179 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
RBM3P98179 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC13.37□□□□□ -0.27
RBM3P98179 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC13.37□□□□□ -0.27
RBM3P98179 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RBM3P98179 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RBM3P98179 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RBM3P98179 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC13.37□□□□□ -0.27
RBM3P98179 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC13.37□□□□□ -0.27
RBM3P98179 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RBM3P98179 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RBM3P98179 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC13.37□□□□□ -0.27
RBM3P98179 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms