Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PHC1P78364 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PHC1P78364 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PHC1P78364 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.24■□□□□ 0.83
PHC1P78364 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PHC1P78364 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PHC1P78364 AC003102.1-202ENST00000563394 1796 ntBASIC20.23■□□□□ 0.83
PHC1P78364 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.23■□□□□ 0.83
PHC1P78364 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
PHC1P78364 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHC1P78364 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.23■□□□□ 0.83
PHC1P78364 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PHC1P78364 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PHC1P78364 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PHC1P78364 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHC1P78364 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.23■□□□□ 0.83
PHC1P78364 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PHC1P78364 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PHC1P78364 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PHC1P78364 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PHC1P78364 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.22■□□□□ 0.83
PHC1P78364 AP005435.1-201ENST00000529293 1178 ntBASIC20.22■□□□□ 0.83
PHC1P78364 AC011298.3-201ENST00000615796 283 ntBASIC20.22■□□□□ 0.83
PHC1P78364 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHC1P78364 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHC1P78364 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHC1P78364 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHC1P78364 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHC1P78364 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PHC1P78364 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.21■□□□□ 0.83
PHC1P78364 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PHC1P78364 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PHC1P78364 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.21■□□□□ 0.83
PHC1P78364 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.21■□□□□ 0.83
PHC1P78364 DUX4L19-201ENST00000557448 1267 ntBASIC20.21■□□□□ 0.83
PHC1P78364 AC131212.1-201ENST00000613771 668 ntBASIC20.21■□□□□ 0.83
PHC1P78364 AP004607.7-201ENST00000527152 1677 ntBASIC20.21■□□□□ 0.83
PHC1P78364 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHC1P78364 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHC1P78364 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PHC1P78364 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHC1P78364 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PHC1P78364 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.2■□□□□ 0.82
PHC1P78364 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PHC1P78364 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHC1P78364 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PHC1P78364 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.2■□□□□ 0.82
PHC1P78364 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.2■□□□□ 0.82
PHC1P78364 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.2■□□□□ 0.82
PHC1P78364 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.2■□□□□ 0.82
PHC1P78364 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHC1P78364 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHC1P78364 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PHC1P78364 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHC1P78364 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHC1P78364 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
PHC1P78364 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PHC1P78364 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHC1P78364 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.19■□□□□ 0.82
PHC1P78364 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.19■□□□□ 0.82
PHC1P78364 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHC1P78364 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PHC1P78364 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.19■□□□□ 0.82
PHC1P78364 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHC1P78364 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.18■□□□□ 0.82
PHC1P78364 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PHC1P78364 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHC1P78364 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PHC1P78364 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHC1P78364 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHC1P78364 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHC1P78364 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.18■□□□□ 0.82
PHC1P78364 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHC1P78364 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHC1P78364 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHC1P78364 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHC1P78364 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHC1P78364 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHC1P78364 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.17■□□□□ 0.82
PHC1P78364 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHC1P78364 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHC1P78364 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHC1P78364 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHC1P78364 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHC1P78364 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.17■□□□□ 0.82
PHC1P78364 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PHC1P78364 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.17■□□□□ 0.82
PHC1P78364 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.17■□□□□ 0.82
PHC1P78364 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHC1P78364 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PHC1P78364 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHC1P78364 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHC1P78364 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHC1P78364 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHC1P78364 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PHC1P78364 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHC1P78364 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.16■□□□□ 0.82
PHC1P78364 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PHC1P78364 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PHC1P78364 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms