Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A1P61619 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A1P61619 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A1P61619 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A1P61619 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A1P61619 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A1P61619 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.51■□□□□ 0.55
SEC61A1P61619 AC133637.1-201ENST00000624115 1537 ntBASIC18.51■□□□□ 0.55
SEC61A1P61619 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A1P61619 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A1P61619 DUX4L4-201ENST00000566884 1269 ntBASIC18.51■□□□□ 0.55
SEC61A1P61619 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A1P61619 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.51■□□□□ 0.55
SEC61A1P61619 FP325331.1-202ENST00000623531 1380 ntBASIC18.51■□□□□ 0.55
SEC61A1P61619 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A1P61619 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A1P61619 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.5■□□□□ 0.55
SEC61A1P61619 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.5■□□□□ 0.55
SEC61A1P61619 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SEC61A1P61619 RASA4CP-201ENST00000424092 1398 ntBASIC18.5■□□□□ 0.55
SEC61A1P61619 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.5■□□□□ 0.55
SEC61A1P61619 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SEC61A1P61619 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SEC61A1P61619 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A1P61619 FAM99A-202ENST00000538190 1989 ntBASIC18.5■□□□□ 0.55
SEC61A1P61619 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A1P61619 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SEC61A1P61619 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A1P61619 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A1P61619 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A1P61619 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A1P61619 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
SEC61A1P61619 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.49■□□□□ 0.55
SEC61A1P61619 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.49■□□□□ 0.55
SEC61A1P61619 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A1P61619 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.49■□□□□ 0.55
SEC61A1P61619 SLC47A1P1-202ENST00000449666 945 ntBASIC18.49■□□□□ 0.55
SEC61A1P61619 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.49■□□□□ 0.55
SEC61A1P61619 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.49■□□□□ 0.55
SEC61A1P61619 AL499627.2-201ENST00000606283 725 ntBASIC18.49■□□□□ 0.55
SEC61A1P61619 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A1P61619 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.49■□□□□ 0.55
SEC61A1P61619 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A1P61619 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A1P61619 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SEC61A1P61619 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A1P61619 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SEC61A1P61619 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A1P61619 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A1P61619 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A1P61619 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SEC61A1P61619 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.48■□□□□ 0.55
SEC61A1P61619 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A1P61619 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A1P61619 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
SEC61A1P61619 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SEC61A1P61619 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A1P61619 BX842568.3-201ENST00000418104 571 ntBASIC18.48■□□□□ 0.55
SEC61A1P61619 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.48■□□□□ 0.55
SEC61A1P61619 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A1P61619 AC233992.3-201ENST00000607491 485 ntBASIC18.48■□□□□ 0.55
SEC61A1P61619 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A1P61619 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.48■□□□□ 0.55
SEC61A1P61619 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SEC61A1P61619 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A1P61619 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.48■□□□□ 0.55
SEC61A1P61619 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A1P61619 AC080038.3-201ENST00000623346 1952 ntBASIC18.48■□□□□ 0.55
SEC61A1P61619 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SEC61A1P61619 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.48■□□□□ 0.55
SEC61A1P61619 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.47■□□□□ 0.55
SEC61A1P61619 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A1P61619 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A1P61619 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A1P61619 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A1P61619 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.47■□□□□ 0.55
SEC61A1P61619 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.47■□□□□ 0.55
SEC61A1P61619 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A1P61619 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A1P61619 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.47■□□□□ 0.55
SEC61A1P61619 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.47■□□□□ 0.55
SEC61A1P61619 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.47■□□□□ 0.55
SEC61A1P61619 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SEC61A1P61619 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A1P61619 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SEC61A1P61619 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A1P61619 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A1P61619 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms