Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.24■□□□□ 0.51
AP3S2P59780 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3S2P59780 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3S2P59780 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3S2P59780 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3S2P59780 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.24■□□□□ 0.51
AP3S2P59780 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3S2P59780 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
AP3S2P59780 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
AP3S2P59780 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3S2P59780 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.24■□□□□ 0.51
AP3S2P59780 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
AP3S2P59780 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP3S2P59780 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP3S2P59780 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
AP3S2P59780 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3S2P59780 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3S2P59780 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3S2P59780 MIR639-201ENST00000384974 98 ntBASIC18.23■□□□□ 0.51
AP3S2P59780 GPX1-201ENST00000419349 1106 ntBASIC18.23■□□□□ 0.51
AP3S2P59780 AC019171.1-201ENST00000601251 1056 ntBASIC18.23■□□□□ 0.51
AP3S2P59780 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.23■□□□□ 0.51
AP3S2P59780 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
AP3S2P59780 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
AP3S2P59780 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.23■□□□□ 0.51
AP3S2P59780 C17orf82-201ENST00000623772 1530 ntBASIC18.23■□□□□ 0.51
AP3S2P59780 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3S2P59780 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
AP3S2P59780 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3S2P59780 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3S2P59780 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3S2P59780 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3S2P59780 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3S2P59780 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3S2P59780 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3S2P59780 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
AP3S2P59780 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3S2P59780 AC120024.1-201ENST00000562672 995 ntBASIC18.22■□□□□ 0.51
AP3S2P59780 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3S2P59780 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
AP3S2P59780 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3S2P59780 AC004687.1-201ENST00000579003 1625 ntBASIC18.22■□□□□ 0.51
AP3S2P59780 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3S2P59780 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.22■□□□□ 0.51
AP3S2P59780 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.21■□□□□ 0.51
AP3S2P59780 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3S2P59780 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3S2P59780 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
AP3S2P59780 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
AP3S2P59780 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3S2P59780 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3S2P59780 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3S2P59780 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP3S2P59780 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3S2P59780 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3S2P59780 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3S2P59780 AL049796.1-201ENST00000565336 1766 ntBASIC18.21■□□□□ 0.51
AP3S2P59780 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3S2P59780 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3S2P59780 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3S2P59780 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3S2P59780 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.21■□□□□ 0.5
AP3S2P59780 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.5
AP3S2P59780 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3S2P59780 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.2■□□□□ 0.5
AP3S2P59780 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.2■□□□□ 0.5
AP3S2P59780 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
AP3S2P59780 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
AP3S2P59780 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
AP3S2P59780 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP3S2P59780 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.2■□□□□ 0.5
AP3S2P59780 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
AP3S2P59780 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3S2P59780 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3S2P59780 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3S2P59780 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3S2P59780 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
AP3S2P59780 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.2■□□□□ 0.5
AP3S2P59780 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.2■□□□□ 0.5
AP3S2P59780 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.2■□□□□ 0.5
AP3S2P59780 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3S2P59780 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
AP3S2P59780 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
AP3S2P59780 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3S2P59780 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3S2P59780 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3S2P59780 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP3S2P59780 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.19■□□□□ 0.5
AP3S2P59780 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3S2P59780 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3S2P59780 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3S2P59780 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP3S2P59780 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3S2P59780 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.19■□□□□ 0.5
AP3S2P59780 MIR4281-201ENST00000580852 62 ntBASIC18.19■□□□□ 0.5
AP3S2P59780 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3S2P59780 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3S2P59780 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3S2P59780 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP3S2P59780 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms