Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.73■■□□□ 1.39
CPT1AP50416 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.73■■□□□ 1.39
CPT1AP50416 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.73■■□□□ 1.39
CPT1AP50416 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.73■■□□□ 1.39
CPT1AP50416 AC066615.1-201ENST00000640911 628 ntBASIC23.73■■□□□ 1.39
CPT1AP50416 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPT1AP50416 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.73■■□□□ 1.39
CPT1AP50416 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPT1AP50416 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPT1AP50416 AC016405.3-201ENST00000607710 860 ntBASIC23.72■■□□□ 1.39
CPT1AP50416 AC092118.2-201ENST00000613495 667 ntBASIC23.72■■□□□ 1.39
CPT1AP50416 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CPT1AP50416 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPT1AP50416 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPT1AP50416 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.71■■□□□ 1.39
CPT1AP50416 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPT1AP50416 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPT1AP50416 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CPT1AP50416 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPT1AP50416 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CPT1AP50416 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPT1AP50416 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.71■■□□□ 1.39
CPT1AP50416 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.71■■□□□ 1.39
CPT1AP50416 KRT16P2-201ENST00000414673 1423 ntBASIC23.71■■□□□ 1.39
CPT1AP50416 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.71■■□□□ 1.39
CPT1AP50416 AC093787.1-201ENST00000450396 207 ntBASIC23.71■■□□□ 1.39
CPT1AP50416 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.71■■□□□ 1.39
CPT1AP50416 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.71■■□□□ 1.39
CPT1AP50416 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.71■■□□□ 1.39
CPT1AP50416 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPT1AP50416 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CPT1AP50416 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPT1AP50416 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CPT1AP50416 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.7■■□□□ 1.39
CPT1AP50416 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CPT1AP50416 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CPT1AP50416 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CPT1AP50416 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPT1AP50416 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPT1AP50416 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CPT1AP50416 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CPT1AP50416 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPT1AP50416 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPT1AP50416 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
CPT1AP50416 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPT1AP50416 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.7■■□□□ 1.38
CPT1AP50416 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.7■■□□□ 1.38
CPT1AP50416 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CPT1AP50416 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.7■■□□□ 1.38
CPT1AP50416 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.7■■□□□ 1.38
CPT1AP50416 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.7■■□□□ 1.38
CPT1AP50416 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPT1AP50416 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPT1AP50416 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPT1AP50416 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.7■■□□□ 1.38
CPT1AP50416 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPT1AP50416 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPT1AP50416 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CPT1AP50416 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPT1AP50416 AC139530.1-201ENST00000575312 1977 ntBASIC23.69■■□□□ 1.38
CPT1AP50416 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.69■■□□□ 1.38
CPT1AP50416 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.69■■□□□ 1.38
CPT1AP50416 RNA5SP413-201ENST00000516373 109 ntBASIC23.69■■□□□ 1.38
CPT1AP50416 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.69■■□□□ 1.38
CPT1AP50416 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CPT1AP50416 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.68■■□□□ 1.38
CPT1AP50416 AL162412.1-201ENST00000567129 965 ntBASIC23.68■■□□□ 1.38
CPT1AP50416 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.68■■□□□ 1.38
CPT1AP50416 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.68■■□□□ 1.38
CPT1AP50416 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CPT1AP50416 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CPT1AP50416 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CPT1AP50416 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPT1AP50416 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.67■■□□□ 1.38
CPT1AP50416 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.67■■□□□ 1.38
CPT1AP50416 POU5F1P3-201ENST00000428824 1078 ntBASIC23.67■■□□□ 1.38
CPT1AP50416 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CPT1AP50416 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.67■■□□□ 1.38
CPT1AP50416 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.67■■□□□ 1.38
CPT1AP50416 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPT1AP50416 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.67■■□□□ 1.38
CPT1AP50416 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPT1AP50416 RBM17P2-201ENST00000616397 1405 ntBASIC23.67■■□□□ 1.38
CPT1AP50416 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPT1AP50416 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPT1AP50416 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPT1AP50416 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPT1AP50416 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPT1AP50416 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPT1AP50416 BX276092.2-201ENST00000417668 665 ntBASIC23.66■■□□□ 1.38
CPT1AP50416 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPT1AP50416 AL591742.1-201ENST00000604433 565 ntBASIC23.66■■□□□ 1.38
CPT1AP50416 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPT1AP50416 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CPT1AP50416 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.65■■□□□ 1.38
CPT1AP50416 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CPT1AP50416 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CPT1AP50416 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CPT1AP50416 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.65■■□□□ 1.38
CPT1AP50416 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms