Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRIM2P49643 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PRIM2P49643 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRIM2P49643 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRIM2P49643 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRIM2P49643 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.16■□□□□ 0.82
PRIM2P49643 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRIM2P49643 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRIM2P49643 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRIM2P49643 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRIM2P49643 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRIM2P49643 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRIM2P49643 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRIM2P49643 BX842568.3-201ENST00000418104 571 ntBASIC20.16■□□□□ 0.82
PRIM2P49643 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.16■□□□□ 0.82
PRIM2P49643 AC024257.2-201ENST00000549699 147 ntBASIC20.16■□□□□ 0.82
PRIM2P49643 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PRIM2P49643 AC135279.3-201ENST00000610945 1311 ntBASIC20.16■□□□□ 0.82
PRIM2P49643 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRIM2P49643 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.16■□□□□ 0.82
PRIM2P49643 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRIM2P49643 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.16■□□□□ 0.82
PRIM2P49643 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.16■□□□□ 0.82
PRIM2P49643 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRIM2P49643 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PRIM2P49643 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRIM2P49643 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.15■□□□□ 0.82
PRIM2P49643 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRIM2P49643 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.15■□□□□ 0.82
PRIM2P49643 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.15■□□□□ 0.82
PRIM2P49643 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.15■□□□□ 0.82
PRIM2P49643 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.15■□□□□ 0.82
PRIM2P49643 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRIM2P49643 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PRIM2P49643 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PRIM2P49643 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PRIM2P49643 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PRIM2P49643 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRIM2P49643 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRIM2P49643 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
PRIM2P49643 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.14■□□□□ 0.81
PRIM2P49643 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.14■□□□□ 0.81
PRIM2P49643 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PRIM2P49643 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRIM2P49643 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.14■□□□□ 0.81
PRIM2P49643 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRIM2P49643 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRIM2P49643 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PRIM2P49643 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRIM2P49643 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRIM2P49643 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PRIM2P49643 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRIM2P49643 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRIM2P49643 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRIM2P49643 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRIM2P49643 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.13■□□□□ 0.81
PRIM2P49643 AC096631.2-201ENST00000436136 790 ntBASIC20.13■□□□□ 0.81
PRIM2P49643 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.13■□□□□ 0.81
PRIM2P49643 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRIM2P49643 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRIM2P49643 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.13■□□□□ 0.81
PRIM2P49643 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRIM2P49643 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.13■□□□□ 0.81
PRIM2P49643 Z98882.1-201ENST00000622160 2253 ntBASIC20.13■□□□□ 0.81
PRIM2P49643 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRIM2P49643 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRIM2P49643 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PRIM2P49643 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRIM2P49643 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRIM2P49643 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRIM2P49643 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRIM2P49643 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.12■□□□□ 0.81
PRIM2P49643 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.12■□□□□ 0.81
PRIM2P49643 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.12■□□□□ 0.81
PRIM2P49643 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRIM2P49643 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRIM2P49643 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.12■□□□□ 0.81
PRIM2P49643 AC005229.4-201ENST00000610085 2198 ntBASIC20.12■□□□□ 0.81
PRIM2P49643 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRIM2P49643 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
PRIM2P49643 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.11■□□□□ 0.81
PRIM2P49643 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRIM2P49643 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.11■□□□□ 0.81
PRIM2P49643 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRIM2P49643 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRIM2P49643 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRIM2P49643 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.11■□□□□ 0.81
PRIM2P49643 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PRIM2P49643 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.11■□□□□ 0.81
PRIM2P49643 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.11■□□□□ 0.81
PRIM2P49643 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.11■□□□□ 0.81
PRIM2P49643 AC104564.3-201ENST00000582367 638 ntBASIC20.11■□□□□ 0.81
PRIM2P49643 AC233992.3-201ENST00000607491 485 ntBASIC20.11■□□□□ 0.81
PRIM2P49643 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRIM2P49643 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.11■□□□□ 0.81
PRIM2P49643 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRIM2P49643 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PRIM2P49643 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
PRIM2P49643 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PRIM2P49643 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms