Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CX3CR1P49238 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CR1P49238 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.66■□□□□ 0.58
CX3CR1P49238 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.66■□□□□ 0.58
CX3CR1P49238 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.66■□□□□ 0.58
CX3CR1P49238 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CX3CR1P49238 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CR1P49238 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
CX3CR1P49238 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.66■□□□□ 0.58
CX3CR1P49238 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CR1P49238 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CX3CR1P49238 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.66■□□□□ 0.58
CX3CR1P49238 AC135279.3-201ENST00000610945 1311 ntBASIC18.66■□□□□ 0.58
CX3CR1P49238 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.66■□□□□ 0.58
CX3CR1P49238 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CR1P49238 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CX3CR1P49238 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CR1P49238 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CR1P49238 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CX3CR1P49238 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.65■□□□□ 0.58
CX3CR1P49238 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.65■□□□□ 0.58
CX3CR1P49238 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CR1P49238 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CR1P49238 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.65■□□□□ 0.58
CX3CR1P49238 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.65■□□□□ 0.58
CX3CR1P49238 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CR1P49238 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CR1P49238 AC233992.3-201ENST00000607491 485 ntBASIC18.65■□□□□ 0.58
CX3CR1P49238 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CX3CR1P49238 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CR1P49238 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CR1P49238 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CR1P49238 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CR1P49238 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CR1P49238 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CR1P49238 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CR1P49238 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.64■□□□□ 0.57
CX3CR1P49238 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CX3CR1P49238 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CX3CR1P49238 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CX3CR1P49238 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.64■□□□□ 0.57
CX3CR1P49238 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.64■□□□□ 0.57
CX3CR1P49238 AC126544.1-201ENST00000580842 1059 ntBASIC18.64■□□□□ 0.57
CX3CR1P49238 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CX3CR1P49238 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CX3CR1P49238 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CX3CR1P49238 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CX3CR1P49238 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CX3CR1P49238 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.64■□□□□ 0.57
CX3CR1P49238 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CX3CR1P49238 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.64■□□□□ 0.57
CX3CR1P49238 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CR1P49238 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.63■□□□□ 0.57
CX3CR1P49238 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CR1P49238 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CR1P49238 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CX3CR1P49238 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CR1P49238 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CR1P49238 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CR1P49238 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CR1P49238 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.63■□□□□ 0.57
CX3CR1P49238 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.63■□□□□ 0.57
CX3CR1P49238 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CR1P49238 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
CX3CR1P49238 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CR1P49238 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CR1P49238 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CX3CR1P49238 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CR1P49238 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CR1P49238 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CR1P49238 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.62■□□□□ 0.57
CX3CR1P49238 AC096631.2-201ENST00000436136 790 ntBASIC18.62■□□□□ 0.57
CX3CR1P49238 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.62■□□□□ 0.57
CX3CR1P49238 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CR1P49238 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.62■□□□□ 0.57
CX3CR1P49238 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.62■□□□□ 0.57
CX3CR1P49238 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.62■□□□□ 0.57
CX3CR1P49238 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CR1P49238 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CR1P49238 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.62■□□□□ 0.57
CX3CR1P49238 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.62■□□□□ 0.57
CX3CR1P49238 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.62■□□□□ 0.57
CX3CR1P49238 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.61■□□□□ 0.57
CX3CR1P49238 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.61■□□□□ 0.57
CX3CR1P49238 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CX3CR1P49238 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.61■□□□□ 0.57
CX3CR1P49238 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CX3CR1P49238 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.61■□□□□ 0.57
CX3CR1P49238 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CX3CR1P49238 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CX3CR1P49238 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.61■□□□□ 0.57
CX3CR1P49238 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CX3CR1P49238 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CX3CR1P49238 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CX3CR1P49238 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CX3CR1P49238 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.6■□□□□ 0.57
CX3CR1P49238 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.6■□□□□ 0.57
CX3CR1P49238 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CX3CR1P49238 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.6■□□□□ 0.57
CX3CR1P49238 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms