Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CTSKP43235 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.15■□□□□ 0.98
CTSKP43235 AC010141.2-201ENST00000452426 721 ntBASIC21.15■□□□□ 0.98
CTSKP43235 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.15■□□□□ 0.98
CTSKP43235 KRT18P6-201ENST00000555540 1265 ntBASIC21.15■□□□□ 0.98
CTSKP43235 AL138781.1-201ENST00000566567 1274 ntBASIC21.15■□□□□ 0.98
CTSKP43235 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.15■□□□□ 0.98
CTSKP43235 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSKP43235 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSKP43235 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSKP43235 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSKP43235 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSKP43235 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.98
CTSKP43235 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTSKP43235 AL117328.2-201ENST00000624617 1940 ntBASIC21.14■□□□□ 0.98
CTSKP43235 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSKP43235 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSKP43235 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSKP43235 SLC29A4P1-201ENST00000398760 971 ntBASIC21.14■□□□□ 0.97
CTSKP43235 CNN2P6-201ENST00000439038 900 ntBASIC21.14■□□□□ 0.97
CTSKP43235 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.14■□□□□ 0.97
CTSKP43235 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CTSKP43235 KRT18P20-201ENST00000548986 1279 ntBASIC21.14■□□□□ 0.97
CTSKP43235 AC138907.5-202ENST00000569484 235 ntBASIC21.14■□□□□ 0.97
CTSKP43235 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSKP43235 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSKP43235 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSKP43235 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.14■□□□□ 0.97
CTSKP43235 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSKP43235 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CTSKP43235 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.13■□□□□ 0.97
CTSKP43235 LINC01960-201ENST00000563759 1884 ntBASIC21.13■□□□□ 0.97
CTSKP43235 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.13■□□□□ 0.97
CTSKP43235 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTSKP43235 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSKP43235 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CTSKP43235 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.13■□□□□ 0.97
CTSKP43235 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.13■□□□□ 0.97
CTSKP43235 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTSKP43235 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSKP43235 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTSKP43235 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTSKP43235 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSKP43235 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSKP43235 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.12■□□□□ 0.97
CTSKP43235 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSKP43235 AP004607.7-201ENST00000527152 1677 ntBASIC21.12■□□□□ 0.97
CTSKP43235 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSKP43235 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.12■□□□□ 0.97
CTSKP43235 TSPY20P-201ENST00000450910 630 ntBASIC21.12■□□□□ 0.97
CTSKP43235 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSKP43235 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSKP43235 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSKP43235 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CTSKP43235 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSKP43235 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSKP43235 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSKP43235 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.12■□□□□ 0.97
CTSKP43235 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSKP43235 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CTSKP43235 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSKP43235 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSKP43235 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.11■□□□□ 0.97
CTSKP43235 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSKP43235 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CTSKP43235 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.11■□□□□ 0.97
CTSKP43235 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CTSKP43235 AC010536.3-201ENST00000620306 533 ntBASIC21.11■□□□□ 0.97
CTSKP43235 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSKP43235 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CTSKP43235 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSKP43235 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CTSKP43235 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CTSKP43235 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSKP43235 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSKP43235 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CTSKP43235 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSKP43235 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSKP43235 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CTSKP43235 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CTSKP43235 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CTSKP43235 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CTSKP43235 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSKP43235 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.1■□□□□ 0.97
CTSKP43235 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSKP43235 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSKP43235 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CTSKP43235 AF201337.1-201ENST00000520239 748 ntBASIC21.1■□□□□ 0.97
CTSKP43235 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.1■□□□□ 0.97
CTSKP43235 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.1■□□□□ 0.97
CTSKP43235 AC133552.2-202ENST00000575694 574 ntBASIC21.1■□□□□ 0.97
CTSKP43235 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSKP43235 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CTSKP43235 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSKP43235 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSKP43235 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSKP43235 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSKP43235 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.09■□□□□ 0.97
CTSKP43235 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSKP43235 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms