Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDE6BP35913 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PDE6BP35913 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.49■■□□□ 1.83
PDE6BP35913 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDE6BP35913 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDE6BP35913 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.48■■□□□ 1.83
PDE6BP35913 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.48■■□□□ 1.83
PDE6BP35913 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.48■■□□□ 1.83
PDE6BP35913 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.48■■□□□ 1.83
PDE6BP35913 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.48■■□□□ 1.83
PDE6BP35913 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.48■■□□□ 1.83
PDE6BP35913 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDE6BP35913 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.48■■□□□ 1.83
PDE6BP35913 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDE6BP35913 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDE6BP35913 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.47■■□□□ 1.83
PDE6BP35913 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDE6BP35913 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.47■■□□□ 1.83
PDE6BP35913 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDE6BP35913 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
PDE6BP35913 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PDE6BP35913 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.47■■□□□ 1.83
PDE6BP35913 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.47■■□□□ 1.83
PDE6BP35913 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.47■■□□□ 1.83
PDE6BP35913 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.47■■□□□ 1.83
PDE6BP35913 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.47■■□□□ 1.83
PDE6BP35913 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDE6BP35913 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDE6BP35913 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
PDE6BP35913 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PDE6BP35913 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
PDE6BP35913 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PDE6BP35913 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE6BP35913 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
PDE6BP35913 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
PDE6BP35913 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PDE6BP35913 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE6BP35913 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE6BP35913 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE6BP35913 RBM17P2-201ENST00000616397 1405 ntBASIC26.46■■□□□ 1.83
PDE6BP35913 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PDE6BP35913 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE6BP35913 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE6BP35913 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.83
PDE6BP35913 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.45■■□□□ 1.83
PDE6BP35913 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.45■■□□□ 1.83
PDE6BP35913 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDE6BP35913 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
PDE6BP35913 AC026366.1-201ENST00000488803 879 ntBASIC26.45■■□□□ 1.82
PDE6BP35913 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.45■■□□□ 1.82
PDE6BP35913 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.45■■□□□ 1.82
PDE6BP35913 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PDE6BP35913 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDE6BP35913 KRT16P2-201ENST00000414673 1423 ntBASIC26.45■■□□□ 1.82
PDE6BP35913 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDE6BP35913 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDE6BP35913 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDE6BP35913 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDE6BP35913 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PDE6BP35913 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
PDE6BP35913 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
PDE6BP35913 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.44■■□□□ 1.82
PDE6BP35913 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDE6BP35913 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.44■■□□□ 1.82
PDE6BP35913 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.44■■□□□ 1.82
PDE6BP35913 UNC93B5-201ENST00000530315 699 ntBASIC26.44■■□□□ 1.82
PDE6BP35913 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.44■■□□□ 1.82
PDE6BP35913 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.44■■□□□ 1.82
PDE6BP35913 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
PDE6BP35913 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDE6BP35913 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDE6BP35913 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDE6BP35913 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
PDE6BP35913 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDE6BP35913 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDE6BP35913 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.43■■□□□ 1.82
PDE6BP35913 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.43■■□□□ 1.82
PDE6BP35913 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.43■■□□□ 1.82
PDE6BP35913 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDE6BP35913 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDE6BP35913 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.42■■□□□ 1.82
PDE6BP35913 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PDE6BP35913 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.42■■□□□ 1.82
PDE6BP35913 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PDE6BP35913 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
PDE6BP35913 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.42■■□□□ 1.82
PDE6BP35913 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDE6BP35913 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.42■■□□□ 1.82
PDE6BP35913 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDE6BP35913 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.41■■□□□ 1.82
PDE6BP35913 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDE6BP35913 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.41■■□□□ 1.82
PDE6BP35913 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDE6BP35913 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
PDE6BP35913 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.41■■□□□ 1.82
PDE6BP35913 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.41■■□□□ 1.82
PDE6BP35913 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.41■■□□□ 1.82
PDE6BP35913 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.41■■□□□ 1.82
PDE6BP35913 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.41■■□□□ 1.82
PDE6BP35913 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms