Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHAP31040 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHAP31040 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHAP31040 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHAP31040 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.03■□□□□ 0.64
SDHAP31040 SMUG1P1-201ENST00000590640 811 ntBASIC19.03■□□□□ 0.64
SDHAP31040 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.03■□□□□ 0.64
SDHAP31040 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHAP31040 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
SDHAP31040 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHAP31040 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.03■□□□□ 0.64
SDHAP31040 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHAP31040 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SDHAP31040 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SDHAP31040 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SDHAP31040 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.02■□□□□ 0.64
SDHAP31040 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.02■□□□□ 0.64
SDHAP31040 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SDHAP31040 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SDHAP31040 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SDHAP31040 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.02■□□□□ 0.64
SDHAP31040 AC126544.1-201ENST00000580842 1059 ntBASIC19.02■□□□□ 0.64
SDHAP31040 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.02■□□□□ 0.64
SDHAP31040 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SDHAP31040 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SDHAP31040 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SDHAP31040 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
SDHAP31040 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAP31040 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SDHAP31040 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAP31040 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAP31040 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAP31040 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAP31040 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SDHAP31040 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAP31040 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAP31040 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAP31040 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.01■□□□□ 0.63
SDHAP31040 IGHV3-19-201ENST00000521488 291 ntBASIC19.01■□□□□ 0.63
SDHAP31040 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SDHAP31040 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.01■□□□□ 0.63
SDHAP31040 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.01■□□□□ 0.63
SDHAP31040 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SDHAP31040 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAP31040 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAP31040 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SDHAP31040 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAP31040 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHAP31040 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SDHAP31040 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19■□□□□ 0.63
SDHAP31040 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
SDHAP31040 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19■□□□□ 0.63
SDHAP31040 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SDHAP31040 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SDHAP31040 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19■□□□□ 0.63
SDHAP31040 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SDHAP31040 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19■□□□□ 0.63
SDHAP31040 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19■□□□□ 0.63
SDHAP31040 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19■□□□□ 0.63
SDHAP31040 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SDHAP31040 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SDHAP31040 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19■□□□□ 0.63
SDHAP31040 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19■□□□□ 0.63
SDHAP31040 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SDHAP31040 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19■□□□□ 0.63
SDHAP31040 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.99■□□□□ 0.63
SDHAP31040 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 AC008406.3-201ENST00000620001 1374 ntBASIC18.99■□□□□ 0.63
SDHAP31040 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.99■□□□□ 0.63
SDHAP31040 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.99■□□□□ 0.63
SDHAP31040 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SDHAP31040 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.99■□□□□ 0.63
SDHAP31040 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.99■□□□□ 0.63
SDHAP31040 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SDHAP31040 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAP31040 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
SDHAP31040 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
SDHAP31040 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SDHAP31040 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAP31040 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAP31040 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAP31040 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SDHAP31040 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
SDHAP31040 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SDHAP31040 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms