Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MYCNOS-205ENST00000641950 531 ntBASIC18.38■□□□□ 0.53
CD40P25942 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD40P25942 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CD40P25942 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD40P25942 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.38■□□□□ 0.53
CD40P25942 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CD40P25942 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD40P25942 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.38■□□□□ 0.53
CD40P25942 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.38■□□□□ 0.53
CD40P25942 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD40P25942 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD40P25942 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CD40P25942 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.37■□□□□ 0.53
CD40P25942 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.37■□□□□ 0.53
CD40P25942 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.37■□□□□ 0.53
CD40P25942 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CD40P25942 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD40P25942 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD40P25942 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD40P25942 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
CD40P25942 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.37■□□□□ 0.53
CD40P25942 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CD40P25942 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.37■□□□□ 0.53
CD40P25942 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD40P25942 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD40P25942 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.37■□□□□ 0.53
CD40P25942 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CD40P25942 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD40P25942 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD40P25942 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CD40P25942 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD40P25942 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD40P25942 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.36■□□□□ 0.53
CD40P25942 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.36■□□□□ 0.53
CD40P25942 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD40P25942 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.36■□□□□ 0.53
CD40P25942 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD40P25942 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CD40P25942 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.36■□□□□ 0.53
CD40P25942 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CD40P25942 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD40P25942 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.35■□□□□ 0.53
CD40P25942 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD40P25942 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD40P25942 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.35■□□□□ 0.53
CD40P25942 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD40P25942 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD40P25942 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD40P25942 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD40P25942 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD40P25942 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.35■□□□□ 0.53
CD40P25942 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.35■□□□□ 0.53
CD40P25942 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.35■□□□□ 0.53
CD40P25942 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD40P25942 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CD40P25942 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD40P25942 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CD40P25942 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD40P25942 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD40P25942 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
CD40P25942 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.34■□□□□ 0.53
CD40P25942 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD40P25942 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD40P25942 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD40P25942 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD40P25942 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD40P25942 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD40P25942 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.34■□□□□ 0.53
CD40P25942 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.34■□□□□ 0.53
CD40P25942 ID1-201ENST00000376105 1233 ntBASIC18.34■□□□□ 0.53
CD40P25942 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD40P25942 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD40P25942 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.34■□□□□ 0.53
CD40P25942 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.34■□□□□ 0.53
CD40P25942 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.34■□□□□ 0.53
CD40P25942 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.34■□□□□ 0.53
CD40P25942 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.34■□□□□ 0.53
CD40P25942 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CD40P25942 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CD40P25942 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.34■□□□□ 0.53
CD40P25942 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.34■□□□□ 0.53
CD40P25942 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.34■□□□□ 0.53
CD40P25942 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.34■□□□□ 0.53
CD40P25942 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.34■□□□□ 0.53
CD40P25942 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD40P25942 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.33■□□□□ 0.53
CD40P25942 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.33■□□□□ 0.53
CD40P25942 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD40P25942 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.33■□□□□ 0.52
CD40P25942 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.33■□□□□ 0.52
CD40P25942 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CD40P25942 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD40P25942 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD40P25942 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD40P25942 AC003102.1-202ENST00000563394 1796 ntBASIC18.32■□□□□ 0.52
CD40P25942 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CD40P25942 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms