Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.44■■□□□ 1.18
MMP8P22894 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.44■■□□□ 1.18
MMP8P22894 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
MMP8P22894 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.43■■□□□ 1.18
MMP8P22894 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.43■■□□□ 1.18
MMP8P22894 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
MMP8P22894 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
MMP8P22894 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
MMP8P22894 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
MMP8P22894 AL137060.1-201ENST00000618151 2648 ntBASIC22.43■■□□□ 1.18
MMP8P22894 IRS3P-201ENST00000223076 1006 ntBASIC22.43■■□□□ 1.18
MMP8P22894 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
MMP8P22894 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
MMP8P22894 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.43■■□□□ 1.18
MMP8P22894 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
MMP8P22894 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.43■■□□□ 1.18
MMP8P22894 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.43■■□□□ 1.18
MMP8P22894 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.43■■□□□ 1.18
MMP8P22894 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
MMP8P22894 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
MMP8P22894 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.43■■□□□ 1.18
MMP8P22894 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MMP8P22894 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.42■■□□□ 1.18
MMP8P22894 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
MMP8P22894 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MMP8P22894 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MMP8P22894 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.42■■□□□ 1.18
MMP8P22894 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MMP8P22894 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.42■■□□□ 1.18
MMP8P22894 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MMP8P22894 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MMP8P22894 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.42■■□□□ 1.18
MMP8P22894 TPRG1LP1-201ENST00000598702 760 ntBASIC22.42■■□□□ 1.18
MMP8P22894 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.42■■□□□ 1.18
MMP8P22894 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
MMP8P22894 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MMP8P22894 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MMP8P22894 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MMP8P22894 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MMP8P22894 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
MMP8P22894 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
MMP8P22894 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MMP8P22894 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MMP8P22894 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MMP8P22894 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MMP8P22894 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.41■■□□□ 1.18
MMP8P22894 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.41■■□□□ 1.18
MMP8P22894 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
MMP8P22894 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MMP8P22894 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MMP8P22894 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MMP8P22894 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP8P22894 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.4■■□□□ 1.18
MMP8P22894 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.4■■□□□ 1.18
MMP8P22894 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
MMP8P22894 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.4■■□□□ 1.18
MMP8P22894 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.4■■□□□ 1.18
MMP8P22894 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MMP8P22894 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP8P22894 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MMP8P22894 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP8P22894 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP8P22894 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP8P22894 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP8P22894 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP8P22894 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MMP8P22894 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.4■■□□□ 1.18
MMP8P22894 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.39■■□□□ 1.18
MMP8P22894 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.39■■□□□ 1.18
MMP8P22894 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
MMP8P22894 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
MMP8P22894 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
MMP8P22894 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
MMP8P22894 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.39■■□□□ 1.17
MMP8P22894 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.39■■□□□ 1.17
MMP8P22894 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
MMP8P22894 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.39■■□□□ 1.17
MMP8P22894 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
MMP8P22894 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.39■■□□□ 1.17
MMP8P22894 MIR6084-201ENST00000622012 110 ntBASIC22.39■■□□□ 1.17
MMP8P22894 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
MMP8P22894 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
MMP8P22894 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
MMP8P22894 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
MMP8P22894 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
MMP8P22894 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.39■■□□□ 1.17
MMP8P22894 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.38■■□□□ 1.17
MMP8P22894 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.38■■□□□ 1.17
MMP8P22894 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MMP8P22894 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MMP8P22894 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.38■■□□□ 1.17
MMP8P22894 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
MMP8P22894 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
MMP8P22894 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.38■■□□□ 1.17
MMP8P22894 FEM1AP4-201ENST00000443167 1987 ntBASIC22.38■■□□□ 1.17
MMP8P22894 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.37■■□□□ 1.17
MMP8P22894 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
MMP8P22894 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MMP8P22894 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MMP8P22894 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms