Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL4P13236 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCL4P13236 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.19■□□□□ 0.82
CCL4P13236 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCL4P13236 AC016405.3-201ENST00000607710 860 ntBASIC20.19■□□□□ 0.82
CCL4P13236 AC008175.2-201ENST00000612840 297 ntBASIC20.19■□□□□ 0.82
CCL4P13236 AC066615.1-201ENST00000640911 628 ntBASIC20.19■□□□□ 0.82
CCL4P13236 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL4P13236 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL4P13236 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL4P13236 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL4P13236 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.19■□□□□ 0.82
CCL4P13236 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CCL4P13236 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL4P13236 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.18■□□□□ 0.82
CCL4P13236 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCL4P13236 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.18■□□□□ 0.82
CCL4P13236 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCL4P13236 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCL4P13236 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCL4P13236 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
CCL4P13236 FAM201B-201ENST00000458407 597 ntBASIC20.18■□□□□ 0.82
CCL4P13236 AC120498.10-201ENST00000621827 505 ntBASIC20.18■□□□□ 0.82
CCL4P13236 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.18■□□□□ 0.82
CCL4P13236 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCL4P13236 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCL4P13236 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.18■□□□□ 0.82
CCL4P13236 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCL4P13236 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCL4P13236 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCL4P13236 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.17■□□□□ 0.82
CCL4P13236 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCL4P13236 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCL4P13236 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CCL4P13236 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCL4P13236 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCL4P13236 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCL4P13236 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.17■□□□□ 0.82
CCL4P13236 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.17■□□□□ 0.82
CCL4P13236 OR10C1-204ENST00000622521 1039 ntBASIC20.17■□□□□ 0.82
CCL4P13236 AC008694.1-202ENST00000636953 945 ntBASIC20.17■□□□□ 0.82
CCL4P13236 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCL4P13236 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCL4P13236 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.17■□□□□ 0.82
CCL4P13236 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCL4P13236 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.17■□□□□ 0.82
CCL4P13236 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCL4P13236 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.16■□□□□ 0.82
CCL4P13236 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.16■□□□□ 0.82
CCL4P13236 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.16■□□□□ 0.82
CCL4P13236 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.16■□□□□ 0.82
CCL4P13236 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.16■□□□□ 0.82
CCL4P13236 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.16■□□□□ 0.82
CCL4P13236 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
CCL4P13236 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CCL4P13236 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCL4P13236 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.15■□□□□ 0.82
CCL4P13236 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCL4P13236 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCL4P13236 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCL4P13236 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.15■□□□□ 0.82
CCL4P13236 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCL4P13236 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCL4P13236 AC069236.1-201ENST00000604339 616 ntBASIC20.15■□□□□ 0.82
CCL4P13236 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CCL4P13236 AC093323.1-202ENST00000635031 2045 ntBASIC20.15■□□□□ 0.82
CCL4P13236 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCL4P13236 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCL4P13236 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCL4P13236 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCL4P13236 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CCL4P13236 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCL4P13236 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CCL4P13236 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCL4P13236 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CCL4P13236 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.14■□□□□ 0.81
CCL4P13236 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.14■□□□□ 0.81
CCL4P13236 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.14■□□□□ 0.81
CCL4P13236 POU5F1P4-201ENST00000413175 1085 ntBASIC20.14■□□□□ 0.81
CCL4P13236 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCL4P13236 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.14■□□□□ 0.81
CCL4P13236 RNA5SP413-201ENST00000516373 109 ntBASIC20.14■□□□□ 0.81
CCL4P13236 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.14■□□□□ 0.81
CCL4P13236 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.14■□□□□ 0.81
CCL4P13236 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
CCL4P13236 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.14■□□□□ 0.81
CCL4P13236 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCL4P13236 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms