Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC10.02□□□□□ -0.815e-6■■□□□ 11.7
XRCC6P12956 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.373e-6■■□□□ 11.7
XRCC6P12956 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.913e-6■■□□□ 11.7
XRCC6P12956 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC18.56■□□□□ 0.562e-6■■□□□ 11.6
XRCC6P12956 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.462e-6■■□□□ 11.6
XRCC6P12956 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC17.43■□□□□ 0.382e-6■■□□□ 11.6
XRCC6P12956 TMC6-207ENST00000586697 571 ntTSL 416.46■□□□□ 0.231e-7■■□□□ 11.6
XRCC6P12956 SNORD11B-201ENST00000607707 90 ntBASIC2.66□□□□□ -1.981e-24■■□□□ 11.6
XRCC6P12956 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.497e-24■■□□□ 11.6
XRCC6P12956 RPL21-206ENST00000466550 756 ntTSL 212.39□□□□□ -0.437e-24■■□□□ 11.6
XRCC6P12956 RPL21-202ENST00000311549 815 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.587e-24■■□□□ 11.6
XRCC6P12956 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.627e-24■■□□□ 11.6
XRCC6P12956 RPL21-204ENST00000326092 641 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.657e-24■■□□□ 11.6
XRCC6P12956 RPL21-208ENST00000483765 453 ntTSL 35.77□□□□□ -1.497e-24■■□□□ 11.6
XRCC6P12956 RPL21-205ENST00000461690 681 ntTSL 54.77□□□□□ -1.657e-24■■□□□ 11.6
XRCC6P12956 RPL21-209ENST00000485756 675 ntTSL 23.81□□□□□ -1.87e-24■■□□□ 11.6
XRCC6P12956 RPL21-210ENST00000493317 438 ntTSL 23.04□□□□□ -1.927e-24■■□□□ 11.6
XRCC6P12956 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC13.63□□□□□ -0.235e-6■■□□□ 11.6
XRCC6P12956 MAN2A2-202ENST00000557865 2671 ntTSL 217.31■□□□□ 0.362e-6■■□□□ 11.6
XRCC6P12956 MAN2A2-230ENST00000561448 1443 ntTSL 212.53□□□□□ -0.42e-6■■□□□ 11.6
XRCC6P12956 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.412e-6■■□□□ 11.6
XRCC6P12956 MAN2C1-230ENST00000566099 1316 ntTSL 524.81■■□□□ 1.562e-6■■□□□ 11.5
XRCC6P12956 MAN2C1-235ENST00000567163 1356 ntTSL 524.75■■□□□ 1.552e-6■■□□□ 11.5
XRCC6P12956 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.07■■□□□ 1.448e-11■■□□□ 11.5
XRCC6P12956 MAN2C1-219ENST00000564570 803 ntTSL 523.97■■□□□ 1.432e-6■■□□□ 11.5
XRCC6P12956 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.49■■□□□ 1.358e-11■■□□□ 11.5
XRCC6P12956 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.09■■□□□ 1.292e-6■■□□□ 11.5
XRCC6P12956 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.28e-11■■□□□ 11.5
XRCC6P12956 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.098e-11■■□□□ 11.5
XRCC6P12956 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.27■■□□□ 18e-11■■□□□ 11.5
XRCC6P12956 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.948e-11■■□□□ 11.5
XRCC6P12956 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.938e-11■■□□□ 11.5
XRCC6P12956 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.778e-11■■□□□ 11.5
XRCC6P12956 CTSB-203ENST00000420692 2230 ntTSL 219.73■□□□□ 0.758e-11■■□□□ 11.5
XRCC6P12956 CTSB-222ENST00000531551 1855 ntTSL 1 (best)19.67■□□□□ 0.748e-11■■□□□ 11.5
XRCC6P12956 NARF-203ENST00000374611 1722 ntTSL 518.65■□□□□ 0.588e-11■■□□□ 11.5
XRCC6P12956 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.38■□□□□ 0.538e-11■■□□□ 11.5
XRCC6P12956 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC17.55■□□□□ 0.42e-6■■□□□ 11.5
XRCC6P12956 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.368e-11■■□□□ 11.5
XRCC6P12956 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.358e-11■■□□□ 11.5
XRCC6P12956 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC16.71■□□□□ 0.272e-6■■□□□ 11.5
XRCC6P12956 CTSB-211ENST00000526481 660 ntTSL 516.13■□□□□ 0.178e-11■■□□□ 11.5
XRCC6P12956 FAM182B-203ENST00000424021 605 ntTSL 516.01■□□□□ 0.158e-11■■□□□ 11.5
XRCC6P12956 NARF-220ENST00000582907 1454 ntTSL 515.84■□□□□ 0.138e-11■■□□□ 11.5
XRCC6P12956 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.112e-6■■□□□ 11.5
XRCC6P12956 NARF-209ENST00000577812 2598 ntTSL 515.1■□□□□ 0.018e-11■■□□□ 11.5
XRCC6P12956 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.028e-11■■□□□ 11.5
XRCC6P12956 NARF-225ENST00000584445 2484 ntTSL 214.72□□□□□ -0.058e-11■■□□□ 11.5
XRCC6P12956 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC14.32□□□□□ -0.122e-6■■□□□ 11.5
XRCC6P12956 NARF-227ENST00000584965 300 ntTSL 311.69□□□□□ -0.548e-11■■□□□ 11.5
XRCC6P12956 NARF-211ENST00000578820 625 ntTSL 311.54□□□□□ -0.568e-11■■□□□ 11.5
XRCC6P12956 NARF-222ENST00000583908 430 ntTSL 311.06□□□□□ -0.648e-11■■□□□ 11.5
XRCC6P12956 MED24-231ENST00000584782 542 ntTSL 310.49□□□□□ -0.738e-11■■□□□ 11.5
XRCC6P12956 NARF-226ENST00000584513 500 ntTSL 310.4□□□□□ -0.748e-11■■□□□ 11.5
XRCC6P12956 MED24-228ENST00000581058 524 ntTSL 49.6□□□□□ -0.878e-11■■□□□ 11.5
XRCC6P12956 SNORD124-201ENST00000459577 104 ntBASIC1.22□□□□□ -2.218e-11■■□□□ 11.5
XRCC6P12956 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.24■□□□□ 0.833e-6■■□□□ 11.5
XRCC6P12956 CDK19-207ENST00000468997 1083 ntTSL 1 (best)15.93■□□□□ 0.145e-11■■□□□ 11.5
XRCC6P12956 CDK19-205ENST00000460913 448 ntTSL 513.56□□□□□ -0.245e-11■■□□□ 11.5
XRCC6P12956 CDK19-204ENST00000457688 955 ntTSL 511.9□□□□□ -0.55e-11■■□□□ 11.5
XRCC6P12956 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.46□□□□□ -0.95e-11■■□□□ 11.5
XRCC6P12956 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC15.46■□□□□ 0.075e-7■■□□□ 11.5
XRCC6P12956 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.535e-6■■□□□ 11.5
XRCC6P12956 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.16■■■■□ 3.385e-6■■□□□ 11.5
XRCC6P12956 KDM4B-205ENST00000588337 504 ntTSL 529.91■■■□□ 2.381e-7■■□□□ 11.5
XRCC6P12956 CAPN15-207ENST00000568988 911 ntTSL 329.35■■■□□ 2.295e-6■■□□□ 11.5
XRCC6P12956 CAPN15-202ENST00000562370 942 ntTSL 229.35■■■□□ 2.295e-6■■□□□ 11.5
XRCC6P12956 RUSC1-215ENST00000492536 1069 ntTSL 326.28■■□□□ 1.81e-7■■□□□ 11.5
XRCC6P12956 RUSC1-210ENST00000473331 782 ntTSL 226.27■■□□□ 1.81e-7■■□□□ 11.5
XRCC6P12956 GLB1-205ENST00000436768 558 ntTSL 325.74■■□□□ 1.715e-6■■□□□ 11.5
XRCC6P12956 ARFGAP1-214ENST00000520485 1548 ntTSL 225.54■■□□□ 1.685e-6■■□□□ 11.5
XRCC6P12956 CAPN15-208ENST00000637507 1482 ntTSL 524.64■■□□□ 1.545e-6■■□□□ 11.5
XRCC6P12956 CAPN15-205ENST00000567216 3174 ntTSL 1 (best)24.59■■□□□ 1.535e-6■■□□□ 11.5
XRCC6P12956 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.56■■□□□ 1.369e-10■■□□□ 11.5
XRCC6P12956 RUSC1-207ENST00000467820 915 ntTSL 323.3■■□□□ 1.321e-7■■□□□ 11.5
XRCC6P12956 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.295e-6■■□□□ 11.5
XRCC6P12956 AC079781.5-201ENST00000641390 3211 nt23.06■■□□□ 1.289e-10■■□□□ 11.5
XRCC6P12956 ARFGAP1-209ENST00000518794 2727 ntTSL 1 (best)22.68■■□□□ 1.225e-6■■□□□ 11.5
XRCC6P12956 PPP1CA-204ENST00000526510 1677 ntTSL 1 (best)22.47■■□□□ 1.195e-6■■□□□ 11.5
XRCC6P12956 AC079781.5-203ENST00000641315 2059 nt22.35■■□□□ 1.179e-10■■□□□ 11.5
XRCC6P12956 SCART1-205ENST00000488261 4709 ntTSL 222.31■■□□□ 1.165e-6■■□□□ 11.5
XRCC6P12956 SCART1-202ENST00000463137 4756 ntTSL 222.19■■□□□ 1.145e-6■■□□□ 11.5
XRCC6P12956 SCART1-204ENST00000482993 4904 ntTSL 222.11■■□□□ 1.135e-6■■□□□ 11.5
XRCC6P12956 PHGDH-210ENST00000641115 1638 ntBASIC22.1■■□□□ 1.135e-6■■□□□ 11.5
XRCC6P12956 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.095e-6■■□□□ 11.5
XRCC6P12956 ARFGAP1-205ENST00000468975 2640 ntTSL 221.72■■□□□ 1.075e-6■■□□□ 11.5
XRCC6P12956 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.72■■□□□ 1.075e-6■■□□□ 11.5
XRCC6P12956 RUSC1-206ENST00000462780 2420 ntTSL 221.54■■□□□ 1.041e-7■■□□□ 11.5
XRCC6P12956 HRAS-207ENST00000468682 749 ntTSL 321.46■■□□□ 1.035e-6■■□□□ 11.5
XRCC6P12956 PHGDH-226ENST00000641756 2132 nt21.39■■□□□ 1.015e-6■■□□□ 11.5
XRCC6P12956 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.33■■□□□ 1.019e-10■■□□□ 11.5
XRCC6P12956 RUSC1-208ENST00000468764 682 ntTSL 321.19■□□□□ 0.981e-7■■□□□ 11.5
XRCC6P12956 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.1■□□□□ 0.975e-6■■□□□ 11.5
XRCC6P12956 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.955e-6■■□□□ 11.5
XRCC6P12956 ARFGAP1-204ENST00000395285 2697 ntTSL 220.97■□□□□ 0.955e-6■■□□□ 11.5
XRCC6P12956 MICALL2-208ENST00000472100 5248 ntTSL 220.94■□□□□ 0.945e-6■■□□□ 11.5
XRCC6P12956 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.92■□□□□ 0.945e-6■■□□□ 11.5
XRCC6P12956 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.85■□□□□ 0.939e-10■■□□□ 11.5
XRCC6P12956 PHGDH-209ENST00000641074 1780 ntBASIC20.8■□□□□ 0.925e-6■■□□□ 11.5
XRCC6P12956 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.915e-6■■□□□ 11.5
Retrieved 100 of 6,788 protein–RNA pairs in 45.6 ms