Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.6■□□□□ 0.57
UBCP0CG48 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.6■□□□□ 0.57
UBCP0CG48 DUX4L19-201ENST00000557448 1267 ntBASIC18.6■□□□□ 0.57
UBCP0CG48 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
UBCP0CG48 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBCP0CG48 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
UBCP0CG48 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBCP0CG48 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBCP0CG48 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBCP0CG48 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
UBCP0CG48 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBCP0CG48 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBCP0CG48 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBCP0CG48 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.59■□□□□ 0.57
UBCP0CG48 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
UBCP0CG48 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.59■□□□□ 0.57
UBCP0CG48 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBCP0CG48 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
UBCP0CG48 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBCP0CG48 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.59■□□□□ 0.57
UBCP0CG48 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.59■□□□□ 0.57
UBCP0CG48 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.59■□□□□ 0.57
UBCP0CG48 AC010525.1-201ENST00000585559 441 ntBASIC18.59■□□□□ 0.57
UBCP0CG48 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBCP0CG48 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBCP0CG48 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
UBCP0CG48 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBCP0CG48 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.58■□□□□ 0.57
UBCP0CG48 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
UBCP0CG48 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.58■□□□□ 0.56
UBCP0CG48 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBCP0CG48 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBCP0CG48 SYT6-210ENST00000641643 1587 ntBASIC18.58■□□□□ 0.56
UBCP0CG48 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBCP0CG48 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBCP0CG48 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBCP0CG48 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBCP0CG48 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBCP0CG48 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBCP0CG48 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBCP0CG48 AF106564.1-201ENST00000607058 2553 ntBASIC18.57■□□□□ 0.56
UBCP0CG48 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.57■□□□□ 0.56
UBCP0CG48 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBCP0CG48 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.57■□□□□ 0.56
UBCP0CG48 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.57■□□□□ 0.56
UBCP0CG48 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBCP0CG48 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UBCP0CG48 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBCP0CG48 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
UBCP0CG48 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UBCP0CG48 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBCP0CG48 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.56■□□□□ 0.56
UBCP0CG48 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBCP0CG48 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBCP0CG48 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBCP0CG48 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
UBCP0CG48 AP005435.1-201ENST00000529293 1178 ntBASIC18.56■□□□□ 0.56
UBCP0CG48 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.56■□□□□ 0.56
UBCP0CG48 AC136469.2-201ENST00000623944 1028 ntBASIC18.56■□□□□ 0.56
UBCP0CG48 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
UBCP0CG48 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBCP0CG48 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.56■□□□□ 0.56
UBCP0CG48 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBCP0CG48 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBCP0CG48 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBCP0CG48 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBCP0CG48 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBCP0CG48 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBCP0CG48 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBCP0CG48 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBCP0CG48 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBCP0CG48 AP004607.7-201ENST00000527152 1677 ntBASIC18.55■□□□□ 0.56
UBCP0CG48 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBCP0CG48 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.55■□□□□ 0.56
UBCP0CG48 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBCP0CG48 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBCP0CG48 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.55■□□□□ 0.56
UBCP0CG48 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.55■□□□□ 0.56
UBCP0CG48 AC011298.3-201ENST00000615796 283 ntBASIC18.55■□□□□ 0.56
UBCP0CG48 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBCP0CG48 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.55■□□□□ 0.56
UBCP0CG48 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBCP0CG48 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBCP0CG48 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UBCP0CG48 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBCP0CG48 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBCP0CG48 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBCP0CG48 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBCP0CG48 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UBCP0CG48 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
UBCP0CG48 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.54■□□□□ 0.56
UBCP0CG48 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
UBCP0CG48 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBCP0CG48 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBCP0CG48 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBCP0CG48 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBCP0CG48 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UBCP0CG48 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UBCP0CG48 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBCP0CG48 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms